Paenibacillus kribbensis: B4V02_03015
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Entry
B4V02_03015 CDS
T05249
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B4V02_03015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkb03021
]
B4V02_03015
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_03015
Enzymes [BR:
pkb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B4V02_03015
Transcription machinery [BR:
pkb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B4V02_03015
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B4V02_03015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
PASTA
RAD51D_N
OPA3
Motif
Other DBs
NCBI-ProteinID:
ASR45755
UniProt:
A0A222WHT6
LinkDB
All DBs
Position
673865..674809
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVDVNDDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFATVPGVKEDVTEIILNLKALSLKIHSDEEKVLEIDAEGEGVVTAGDIRADSDVEI
LNPDLHIATLGPGSRLHMRIFANRGRGYVKQDRNKRDDQPIGVIPVDSIYTPIARVNYGV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHVMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKSEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaaaattgagacggttgacgtcaatgatgatggcacctat
ggaaaattcgtagtagaaccgctggaacgcggatacggtacgacgctggggaactctctt
cgccgtattctgttatcctcgttaccgggggcagcagtcacatcggttcagatcgatggg
gttctgcacgagtttgcaacggttcccggtgtgaaggaagacgtaacggagatcatactg
aacttgaaagctttatcgcttaaaatccactcggatgaagagaaggtactcgaaatcgat
gcggaaggcgaaggagttgtaacggcaggagatatccgtgcggatagtgatgtggaaatt
cttaatccggatcttcacattgctactctcggaccgggttcgagacttcacatgcgtatt
tttgccaatcgtggtcgcggttacgttaagcaggatcggaataaacgtgatgaccagccg
atcggcgtcattcccgtcgactccatctacactccgattgcacgcgtgaactacggcgta
gaaaatacgcgtgtcggccaggttacgaattatgacaagctgacacttgaggtttggact
gacggaagtattcgacctgaggaagcagtgagccttggagccaaaattttgaccgagcat
gtaatgttgttcgtgggtctcacggacgaagcaaaagatgcggaaattatggtcgaaaaa
gaagaagataagaaagaaaaagttcttgaaatgacgatcgaagagctggatctctccgtc
cgttcctataactgccttaagcgcgctggtatcaatacggtacaagaactcacgactaaa
tctgaagaagatatgatgaaggttcgcaacttgggccgcaaatctttggaagaagtacaa
gagaagcttgaggaacttggtttaggacttcgtacggaagaatag
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