Paenibacillus kribbensis: B4V02_05590
Help
Entry
B4V02_05590 CDS
T05249
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03420
Nucleotide excision repair
pkb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B4V02_05590
03430 Mismatch repair
B4V02_05590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_05590
Enzymes [BR:
pkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B4V02_05590
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B4V02_05590
MMR (mismatch excision repair)
Other MMR factors
B4V02_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
SLFN-g3_helicase
AAA_16
DEAD
nSTAND3
PhoH
NACHT
MC2
ResIII
CALCOCO1
Motif
Other DBs
NCBI-ProteinID:
ASR46199
UniProt:
A0A222WIE2
LinkDB
All DBs
Position
1211291..1213708
Genome browser
AA seq
805 aa
AA seq
DB search
METKDWQQEQERLERVRNKLQARIAELEPEVAGLRDQAADIRKRFWEDVTINTSTHEDFE
ETFYTINQQSAVLAERERGHKLLTQQLKSMNRLLPSPYFGRIDFQEDGLDLSEQIYIGVS
SFVDEDGLSFLIYDWRTPIASLYYDYSPGRASYVTPGGRIEGTMELKRQFQIQNGQIRNM
FDASETIGDELLQQVLGKGADSQMKSIVATIQKEQNAIIRNDKSRMLIVQGAAGSGKTSA
ALQRVAYLLYKHRQTIRADQIVLFSPNPMFASYISTVLPELGEENMQQTTFQEYLDYWLG
SSLRPEDPFDQIEYVLTAQGAPGYEARLQGIEYKASEAFLQALQNYGMWLGREGMQFNDI
RFRDRGLITAEQMRAKFYSYDRSLPLYNRVVLLQEWLLNELASLERMERDALWVEEELNY
LDTEQYAEVFGMLHKEKEVFDVAEQYAVVREKMNNKRREDEGDFDFARREEDLLRRRIVK
ESFKPLRKIVKKLLFVDIKGIYGQLFVDEAAYREKTNGAVIPLLWPEICRQTKEALLRNE
LFYEDATPYLYVKELIEGVRTNTEIRYVFVDEGQDYSPFQYEYLKKLFPRARMTVLGDFG
QAIFMQATSLDASDSPLVRLFGEDETSLVRLVRSYRSTREIVEFTKSMLPGGEEIVPFER
GGPKPLLTRLDGGEKRDAQILADIAALRAEGFDSIAVITKTAAESREAYESLRTHGGEAL
QLITKETSGFEKGVMVIPVYLAKGVEFDAVLVYDASSESYGRDNERKLLYTACTRAMHRL
HLYTTGDWSSFVQALPANLYEKASY
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaggattggcagcaggaacaggagcggctggaacgagtcaggaacaagctg
caggcgagaatcgctgaactggagccggaggttgccggactgcgtgatcaggctgcggac
atccgcaagcggttttgggaagatgttacgatcaacacaagcacgcatgaagatttcgaa
gagaccttctacacgattaatcagcagtcggcggtcttggccgaacgggagcgcggccac
aagctgttgacgcagcaactgaaaagcatgaaccgtctcctcccgtctccttatttcgga
cgcatcgactttcaggaggatgggctggacctcagcgagcagatctatatcggcgtatct
tccttcgtcgacgaagacggattgagctttctgatctatgactggcgtacgccaatcgca
agcctgtactacgactattcccccggccgagcgtcttatgtcacgccgggcggacgaatc
gaagggacgatggagctcaaacggcaatttcagattcaaaacgggcaaatccgcaacatg
tttgacgcgagtgaaacgatcggagacgaattgctgcagcaagtgctcggcaaaggtgca
gactcgcaaatgaagagtatcgtagcaactattcagaaggaacaaaacgccatcatccgc
aatgacaaaagccggatgcttatcgtacagggggcggccggcagcggtaagacttccgcg
gcattgcagcgggtggcgtacttgctctacaaacaccgtcagacgatcagagctgatcag
atcgttcttttctcaccgaatccgatgtttgccagttatatctccaccgtccttccggag
ctcggtgaagagaatatgcagcagacgacttttcaagaatatctcgactattggttaggt
tcctcgttacggccggaggatccctttgatcagatcgaatacgtactgaccgcacaagga
gcgccgggatatgaggctcgtcttcaggggatcgagtataaagcttccgaggctttcctg
caagccctgcagaactatggaatgtggttgggacgggaaggcatgcaattcaacgatatt
cggttccgggaccgcggtttgattaccgcggagcaaatgagagcgaaattttacagttat
gaccgttcactgccgttgtacaatcgtgtcgttctcttgcaagaatggctgctgaatgaa
ttggcctcgctggaacgtatggaacgggacgcgctttgggtagaggaagagctgaattat
ctcgacaccgagcagtacgcggaagtcttcggaatgctgcacaaagagaaggaagtattc
gacgttgcggaacaatacgccgtagttcgcgagaaaatgaacaacaagcgacgggaagat
gaaggcgactttgattttgcacggagggaggaagatctgctccgccgcaggattgtgaaa
gaaagctttaaaccgctaaggaaaatcgtgaagaagctcttgtttgtagatatcaaaggc
atatatggccaattgtttgttgacgaagccgcttatcgggagaaaacgaatggggccgtc
atccccctgctgtggcctgaaatatgcaggcaaaccaaggaagcgctgctccggaacgag
ttattctacgaggatgcgactccgtatttgtatgtaaaagaactgatcgaaggcgtccgg
acgaacacagaaatccggtatgttttcgttgatgagggtcaggattattcgccgtttcaa
tatgaatatctaaaaaagctgttcccccgtgcccggatgacggtgctcggcgatttcggg
caagcaatcttcatgcaggccacaagtctggacgcatccgattcgccgcttgtccgcctt
ttcggggaagacgaaacaagtcttgttcgcctggtacgcagttatcgttcaaccagggag
attgttgaatttacgaaatcgatgcttccaggcggggaagaaatcgtaccgtttgaaaga
ggaggcccaaaaccacttctcacgagactggacggcggggagaagcgtgatgcgcaaatt
ctggcagacattgcggcgctcagggccgagggcttcgattccattgccgtcattacgaag
accgcagcagaaagccgtgaggcctatgaatcgttacggactcatggaggcgaagctctg
cagctcattacgaaagagacgtcaggctttgaaaaaggagtgatggtcattcccgtgtat
ctcgccaaaggtgtcgagttcgatgcagtcttggtctatgatgcttcgtctgaatcttac
ggccgggacaatgaacgcaagcttctttatacggcgtgtacgagggctatgcaccggctc
catctttacacgacgggcgattggtcgtcgttcgtgcaggcattgcctgcgaatttgtac
gagaaagcgtcatattga
DBGET
integrated database retrieval system
