Paenibacillus kribbensis: B4V02_06240
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Entry
B4V02_06240 CDS
T05249
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03410
Base excision repair
pkb03430
Mismatch repair
pkb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B4V02_06240
03430 Mismatch repair
B4V02_06240
03440 Homologous recombination
B4V02_06240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_06240
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B4V02_06240
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B4V02_06240
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B4V02_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ASR46303
UniProt:
A0A222WKH5
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Position
1345021..1347417
Genome browser
AA seq
798 aa
AA seq
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MLHSQYRWKTPEINLAAAQSLTEELGISPLLSRLLVNRGVTTAGEANRFLYGSVDDIHDP
YLLLGMKEAVPRIRKALEHGEHILIYGDYDADGVSSTSLMIQLMRFLKASYDIYIPHRSN
EGYGLHNHALDWAHQQGVTLVITVDTGISAVEQIDYATSLGIDVIVTDHHEPPAVLPKAY
TLINPKLPGCPYPFKGLAGVGVALKLAQALLDEVPEEWFEIAAIGTVADLMPLHGENRAM
VRRGIQSMKSSAFPGIRALLGVAGVDMPTVTSVNIAFALAPRINASGRLDHAGRAVSLLT
TEQEEEADQLAHALDLLNRERQQVVERIVEQAEQQLAAKLNGGKLPSVIVLAGEGWNVGV
VGIVASKLLERHYRPTIILGIDAETGMCKGSARSIPALDIYSALTDSHELMEHFGGHPSA
AGMTLSRDNLELFEERLNRYAGSILIPEDLIPVAEADMVCRLDEVSLQAVEELELLQPFG
MGNPSPRFVLQGLQLREARKMGREKNHVKLLLEQNGQSLDAIAFQRGDLADFLQQQTELD
LLGELSINEWNGKRSLQLMMQDIRVQAPQIFDYRGVSNPIAELERGLNIFHPRVEERKND
VAVLVHPSSTLRPTGSVNTEFIWLYDKDGTVTPSNGQRDVQQSVKALFVLEPPETPEQLQ
AVWSTFENVENVFLLHSVSERAGRLVIPDRELFKRIYVVLSRMGTQPVDEKAMLPALSRQ
CSCSVRMLSKVLDIFEELEFMTRAEGQFCFVPNPPKRDLTTSPRYQELYDMAEMERYLLD
SDTTQMTNWIMSLMKGAS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
ttgcttcattcgcagtacagatggaagaccccggaaattaatctggcggcggctcagtcg
ttaacagaagagctggggatttcaccattgttgtcccggcttttagtgaaccggggcgtc
actacagccggggaagcaaaccgctttttgtacggaagtgtggatgatatacacgaccct
tatctgcttcttggcatgaaagaggccgtgcctagaattcgcaaggctctggagcacgga
gagcatatattaatctatggcgattatgatgcagacggagtatccagtacatcattgatg
attcagcttatgcgtttcctaaaggcctcttatgatatttatattccccaccgttccaat
gagggatacggcctgcacaatcatgccctggattgggctcatcagcagggagttacgctg
gtcattacggtagatactggaattagtgcagttgagcaaattgattatgcaacatccttg
ggtatcgatgttattgtgaccgatcatcatgagccgcctgctgtgcttccaaaggcgtat
accttgattaatccgaagctgcccggttgtccatacccatttaaaggccttgcaggtgtt
ggtgttgctcttaagctggcgcaggcactgctggatgaggtgcctgaggaatggtttgaa
atcgctgctattggtacggtagcggatttgatgccgttacatggcgagaaccgggcgatg
gtacgtagagggattcaatcgatgaaaagctctgcgtttcctgggattcgggcgttgctt
ggtgtagcaggtgtggatatgcctacagtaacttctgtcaacatcgcatttgccttggca
ccgcgtattaatgccagtggacgtctggatcatgcgggacgagcggtttccctgctgacg
acagaacaagaagaagaagcggatcaactagcgcatgcgctcgatctgcttaaccgtgag
cgtcaacaggtggtcgaacgaattgtggagcaagctgagcagcagctggcggccaagctg
aatggaggcaagctcccctcagttattgttttggccggtgaaggctggaacgtgggggtc
gtcggcattgtggcgtccaagctattggaacgccattatcgtccaaccattattcttggg
atagatgccgagacaggtatgtgtaaaggttctgctcgttctatccctgcattggatatc
tacagtgctcttaccgacagccatgagctgatggagcattttggtggtcatccttcggct
gcgggtatgacgctgagccgtgacaatctggaattgttcgaggagcggcttaaccgctac
gccggttcaattttgataccggaagaccttattccggtagctgaagcagatatggtttgt
cgtctggacgaggtatctttacaggcggttgaagaactggaattgttgcaaccttttggt
atggggaacccttctccacgattcgtattacagggtcttcaattacgcgaggctcgtaaa
atgggacgtgagaaaaatcatgtgaagcttctgctggaacagaacggacaatcgctggat
gcgattgcctttcagcgtggcgatttggctgattttttacagcagcaaaccgagctggac
ctgctgggtgagctgtccattaatgagtggaatggcaaacggtctctccaactgatgatg
caggatattcgtgtgcaggccccgcaaatttttgattatcgcggagtctcgaatcctatt
gccgagttggaacgaggcttgaacatttttcatccgcgtgtagaggagagaaaaaatgac
gttgcggtgttggtacatccgtcatccacacttcgtccaacgggttctgtgaacactgaa
ttcatatggttatacgataaggatggtactgttactcccagcaatggtcaaagggatgtg
cagcaatctgtgaaggcactgttcgtgctggagccaccggaaacgccggagcagctacag
gcagtatggtctacctttgaaaatgtagaaaatgtatttctcctgcactcggtcagtgaa
cgtgctggtcggctcgtaatccctgacagggagctgttcaagcgtatttatgttgtgctt
tcccgcatgggaacacagcctgttgacgaaaaagcaatgctgcctgctcttagtcggcag
tgctcctgttcagtacgtatgttatccaaagtgctggacatcttcgaggagcttgagttt
atgacgcgtgcagaagggcaattttgttttgtgcccaatccgcccaagcgcgatttaacg
acttctccgcgctatcaggaattatatgatatggctgagatggagcgttatttactggat
tcggatacaacacagatgacgaattggatcatgtcgctgatgaagggcgcgtcttag
DBGET
integrated database retrieval system
