Paenibacillus kribbensis: B4V02_06425
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Entry
B4V02_06425 CDS
T05249
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03420
Nucleotide excision repair
pkb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B4V02_06425
03430 Mismatch repair
B4V02_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_06425
Enzymes [BR:
pkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B4V02_06425
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B4V02_06425
MMR (mismatch excision repair)
Other MMR factors
B4V02_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
AAA_30
DEAD
NACHT
AAA_16
PhoH
ResIII
nSTAND3
Catalase_C
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ASR46339
UniProt:
A0A222WIS9
LinkDB
All DBs
Position
1427004..1429145
Genome browser
AA seq
713 aa
AA seq
DB search
MENEFQSAYQEEQHRLSLAMEEIDRRLERLRNIPVYTGHDFTEQVLESAREEKRQDLAKS
AQEPYFGRMDFDERGRGQRKPLYIGKVGVEREETSAYPLVIDWRAPIASLFYSFTGGEET
ASYEAPEGTIEGLVYLKRNVVIRKRILERVADTYNRESDGPAVSDEFLVYRLGENKDNRL
RDIVSTIQAEQDQIIRAAKNTALVIQGVAGSGKTTVALHRLAFLLYQYKDQVSADKMVIF
APNHMFLDYISDVLPELGVGNIQQSTFADWALQLLGLDLPLADPAETLTYWFESGSLRRE
SMDEAPGRFKGSVHFMKLLQAFVERLEPISVPDGDFSPWDGAVLSRTEILNWFNEEYKPY
PLAKRKERVLARVHRWIEMELKKSPSAAALKERKKKAGTREKAYAKKWPQYDALTLYKQL
FRAAKGLPADTAAEMKASLPAAIFKTTQSDLRNQVIREEDLTALVYLHVLIHEVESSQRF
DHVVIDEAQDFSPFHIALLDLFVKGHSFTILGDLSQGIHEYRGVHAWEEMSSLFAPEHTG
YFALTRSYRSTLEIIEFANTILEQGVRGGITAVPVFRSGDPVRTVSYDTSGREQHLLTAF
KELSSKEYRTVSVLTRTLKEAVELHEVFISAGLDVHLIDGGKKQYEGGLSVLPVYLSKGL
EFDAVIVADADHEHYGELAWDAKLLYVGCTRALHELWLMYDGALPGYVQKQPE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgagtttcaaagtgcctatcaagaagaacagcacaggctgtcgcttgctatg
gaggaaattgatcggagattggagcggcttcgtaatataccggtatacaccggacatgat
tttacggagcaagtactggaatccgcgcgggaggaaaagcgtcaggatttggccaaaagc
gcgcaggagccttactttggacgtatggactttgacgagcgtggcagagggcagcgtaag
ccgctgtatatcggtaaggtcggagtggagcgtgaagaaacgtcagcgtatccgctcgtg
attgattggcgtgcgccgattgccagcttgttttattcgtttacaggcggtgaagaaacc
gcgtcttacgaagctcccgagggaaccattgagggtctagtgtatctgaagcgcaacgtt
gtcatccgtaaaagaatcctggaacgggtagccgatacgtacaatcgcgaaagcgacggg
cccgccgtttccgatgaatttctcgtgtatcgtttgggtgagaacaaggataaccgtcta
cgggatatcgtctctaccattcaggccgagcaggatcagattatccgtgcggctaaaaat
acagccctcgttattcagggggtagcgggaagtggcaaaacgacggtagcgctgcatcgt
ctcgcatttttgctttatcagtataaggatcaagtgtcggcggacaagatggtcattttc
gcgccgaaccatatgtttctcgattatatttcagatgtacttccagagctgggggtcgga
aatattcagcaaagtacatttgcggactgggcgctccagttgctggggctggatttacct
ttggcggaccctgccgaaacgttaacttattggtttgagagtggcagcctgagaagggaa
tctatggatgaagcgccgggacgattcaaaggttcggttcattttatgaagctgctgcag
gcttttgtggaacggctggagcctatctcagttcccgacggcgacttttctccatgggat
ggggcggtgctgtcacggactgagattttgaattggttcaatgaggaatacaagccctat
ccgctcgcgaagcggaaggagcgtgtgcttgcaagagtccatcgctggattgaaatggag
ctgaaaaaatcgccttcggcggctgcgctcaaggaacgcaagaaaaaagcagggacccgg
gaaaaggcatatgctaagaaatggccccaatacgatgcgctgacgctttacaagcagctt
tttcgggcagccaaaggattacccgcagatacggctgcggagatgaaggcctctttgccg
gctgctattttcaagaccacacagtcggatttacgaaatcaggtgatccgcgaagaggat
ttgactgccttggtctatcttcatgtactgattcatgaggtagaatcgtctcagcgtttt
gaccatgtggtcattgatgaagcgcaggacttttctccttttcatatcgcattgctggat
ttgttcgtaaaaggtcactcctttacaatactcggcgatttgtcgcaggggattcatgaa
taccgtggcgtacatgcatgggaggaaatgagctctctttttgcgccggaacatacgggg
tattttgcacttacgcggagctatagatcaaccctggaaattatagaatttgcaaatacg
attttggagcagggcgttcgcggcggcattaccgcagttccggtatttcgcagtggcgat
ccggtgcgtaccgtgtcttatgacacatcggggcgtgaacagcatttgcttaccgctttc
aaagagctttcctccaaggagtatcgcaccgtatctgtgctgacacgtaccttgaaagag
gctgtagagctgcatgaggttttcatcagtgcaggactggatgtacatctgattgatggt
ggtaaaaagcaatatgaaggcggcttgtccgttctgcctgtgtatctttccaaaggcttg
gaattcgacgcagtcattgtagcggatgccgaccatgagcattatggagagctggcatgg
gatgccaagctgttgtatgtgggatgtacccgtgcgctccatgagctgtggctcatgtat
gacggtgcgcttcccggctatgtgcagaagcagccggagtaa
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