Paenibacillus kribbensis: B4V02_08400
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Entry
B4V02_08400 CDS
T05249
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pkb
Paenibacillus kribbensis
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_08400
Enzymes [BR:
pkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B4V02_08400
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B4V02_08400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_29
UvrD_C
nSTAND1
AAA_25
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ASR46695
UniProt:
A0A222WKM9
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All DBs
Position
1881952..1885500
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AA seq
1182 aa
AA seq
DB search
MSVRLLIGRSGSGKSTLIRHEMTSMLREQPLGKPMLLLVPEQSSFASEHALLTEAGNGIQ
GSVRAQVMGFHRLAYLVMQETGGSALVPVTEEGKKMLLYKIIRRRKDELSLFKDSGDQLG
FVDRLNTLFTELKQYGNDTRSVPEQLERMHAAGETVPILRGKLKDISLIYEDFERELALK
YIDGEDTLRMLAEQIAESSLVRGADIWMDGYRRFTPHEYKVVEQLMLHASSLTVALTCNR
SYESGQLPHELDLFHPSAATYVKLKGMADELMIEMRTQLLRPDPMPRFKERSALAYLEAY
FEHRTGYRIPQELRDQWADKQPEGIKLYAAANRRAELEGAVREMRRLARDEGARYREMAL
FVRHIEDYEPWVEPIFKQYGVPVFLDQRRSVLHHPLVEMIRASLDIVQRRWRYEDVFRAV
KTDLLLPLDGRVSREDMDRLENYALACGIQGSRWTDGRPWQAVPSLSLELEEQERNRQRD
ETLDLMELCRDVIVTPLRAFEKRLGKARTALEKCEAVYLLLEDAEIGQKLDVFVRQAEEA
GNPEQAKEHRQVWDAVLELLDQIVEMMGDERLDTSLFAGVLETGLAEFRMGLVPPALDQV
LVGNTDRTRVAGIQHAFVLGMNEGVMPAVFHEDGVLNEQERTALNERGVELAPDMTRRLL
DERFLAYSALTSPGKSLWMSYAVTDEEGKSLLPSELVRHVRQLFPHLEERPLAGYPLPGD
AWAAQWEYASHPSEALPQLIAQLRHWRRGGDILSPWWEVYSWYASQQGREKDKLRQLLTS
LFYENHAELQKETSHRLYGSKLRTSVSRMERFVACPFSHFASHGLRLKERQMYRLKAPDI
GQLFHAALGEMAINLRERNISWGSLSTEECRQEAETTVERLAPRLQGEILMSSKRYGYIL
RKLKDIVSRASLILGEHARRGSFEPIGLELDFGPGQPLPPLTFRLDNGVVMEIVGRIDRV
DVAEGEKGLLLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLNAAEEWLGETAYPAGT
LYFHVHNPMLQSPNGLSAEQARQELLKRFKMKGLLLADRDVVGQMDTALDKGYSSILPVA
VKADGSFYSSASVASPEQWDSLLASVRNNIRTIGTRMTEGDVAIEPYRIQQETACTFCSF
KPVCQFDDSLEGSGYNQWGKPGKDQIWNLLGHTQEGKGGMDQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccgtttgttgattggccgctcaggcagtggtaaaagcacgctaatccgtcat
gaaatgacatctatgctacgcgagcagccgctaggcaagcccatgttgctgctcgtaccg
gagcaatcgtcatttgcttccgagcatgcgttgcttacagaagccggaaacggtattcag
gggtcggtgcgcgcccaggtgatgggatttcatcgtcttgcttatttagtcatgcaggaa
accggaggttcagcgctggtgccggtgacggaagagggcaagaagatgcttttatataaa
attatacgtcgtcgcaaggatgaactgagtttgttcaaagactcgggggatcagcttggc
tttgtggaccggttgaatacgttgtttacggagctaaagcagtatgggaatgatacccgg
tctgtaccagagcagctggagcgcatgcatgccgcaggggagacggtcccgattttgcgc
ggtaagctcaaggatatcagtttaatctatgaggattttgaacgagagctggcgcttaaa
tatattgacggtgaggatacgctgcgcatgctggcagaacagattgccgagtcatctctt
gtgcgcggggcagatatttggatggatggctaccgcaggtttacgccgcatgaatacaag
gtggtagagcagcttatgctgcacgcctcttcgttgacggtggcgctgacctgcaaccgc
agctacgagagcggacagcttccgcatgagctggatttgtttcatccgtcggcagctacc
tatgtaaagcttaaaggaatggccgacgagctgatgatagagatgcggacccaattattg
cgcccagatccaatgccgaggtttaaggagcgttcggcgttggcgtatttggaggcatat
tttgaacatcgtacagggtatcggataccgcaggagctacgggatcaatgggcagacaag
cagccggagggcataaagctgtacgctgctgccaatcgtcgtgcagagctggaaggggcc
gtacgcgaaatgcgccgtctggcccgggatgaaggcgcgcgttatcgggaaatggctttg
tttgtacgtcatattgaggattatgagccgtgggtggaaccgatattcaagcaatatggg
gttccggtattcctggatcagcgaagaagtgtactgcatcatcccttagtggaaatgatt
cgggcttcgctggatatcgtccagcggcgttggcggtatgaagatgtattccgtgcggtc
aaaacggatcttctgttgccgctggatggtcgggttagccgtgaggacatggaccgtctg
gaaaattatgcactggcctgtggaatacaaggcagccgctggacagacggacgaccgtgg
caggctgtacccagtctgtcgctggagttggaggagcaggagcggaaccggcaacgggat
gaaacactcgatttgatggagctttgccgtgatgtgatcgtgacgcctttacgtgcgttt
gagaagcgactcggcaaggctcgcacagcactcgagaagtgtgaagcggtatatctgctg
ctggaggatgcagaaatcggtcaaaaactggacgtctttgttcgtcaggctgaggaagct
ggaaatcccgagcaggccaaggagcatcgtcaggtatgggatgcggtgcttgagctgctg
gatcagattgtcgaaatgatgggtgatgaaaggctggatacctctttgttcgcgggtgtg
ctggaaacgggattggctgagttccgtatgggacttgtaccgccagctttggatcaggtg
ctggtcggcaacacggatcgtacacgtgtagctggcatacagcatgcctttgtgctcggt
atgaacgaaggtgtgatgccggctgtgtttcatgaggacggcgtgctgaatgagcaggag
cgtaccgctttgaacgaacgaggcgtagagctggcaccggatatgacaagacgtctgttg
gatgaacgctttctcgcttattcggctcttacgtcccctggcaaaagcctgtggatgagt
tatgctgtgaccgatgaagaagggaagtcgctgctgccatcagagttggttcgccatgtc
cggcagctgtttccgcatctggaagaacgtccattggctggatacccattgccgggagat
gcctgggcagcccaatgggagtatgcttcccatccgtccgaggctttgccacagctcatt
gcgcaattaaggcattggcggcgtggcggagatattctgtctccctggtgggaggtatac
agctggtatgccagccagcaagggcgtgagaaggataagctgcgtcagctgctgacctct
cttttttacgaaaaccacgccgaattgcagaaggaaacgagtcaccgtctgtacggcagc
aagctgcgtaccagtgtatcccggatggaacgttttgtcgcatgtccgttttcgcatttt
gcctctcacggtcttcgtttgaaggagcggcaaatgtatcgcctgaaggcaccggatatc
ggacaattattccatgcagcgctcggggaaatggcgatcaatctgcgggaaagaaacata
agctgggggagtctcagcacggaggagtgccgccaggaggcggaaacgacagtggagcgt
ttggctcctcgcctgcaaggcgagattttaatgagctccaagcgctatggctatatttta
cgcaagctgaaggatattgtgagccgtgcttcattgattttgggtgagcatgcgcgtaga
ggcagctttgagccgattgggctggagctggactttggaccgggccaaccgcttccgccc
ctgacctttcgactggataacggcgttgtcatggaaatcgtcggacggattgaccgtgtg
gatgtggcagagggagaaaaaggcctgctattgcgggttatcgattacaaatcaagccaa
aaggatctgaagctgcatgaggtgtactatggcttgtccctgcaaatgctcacctatctg
gacgtgctgctgaatgcggcagaggaatggttgggcgaaacggcctatccggcggggaca
ctatattttcacgttcacaatccaatgttgcagtcgcctaacggccttagcgcggaacag
gctcgtcaggagcttttgaaacgcttcaaaatgaaaggattattgcttgcggatcgagac
gtggttgggcaaatggatacagcactggataaggggtattcctccattttacctgttgcg
gtgaaggcagacggcagtttttacagcagtgcgtccgtcgcttcgccggaacagtgggat
agtctgctggcttcggtgcgtaacaatattcgaacgattggaacacggatgacagagggc
gatgtagccattgagccttatcgtattcagcaggagacagcatgtacgttctgctcattc
aagcctgtttgtcaatttgacgacagtctggaaggcagtggctacaatcaatggggcaaa
cctggcaaggatcaaatatggaatctgctgggtcatacacaggaagggaaaggaggaatg
gaccaatga
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