Paenibacillus kribbensis: B4V02_09230
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Entry
B4V02_09230 CDS
T05249
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B4V02_09230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_09230
Enzymes [BR:
pkb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B4V02_09230
DNA repair and recombination proteins [BR:
pkb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B4V02_09230
Prokaryotic type
B4V02_09230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASR46846
UniProt:
A0A222WL57
LinkDB
All DBs
Position
2056938..2057606
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AA seq
222 aa
AA seq
DB search
MFGNDWDDVLREEVEKSYFNELRYTLAREYKIHKVYPQKEDLFSALKLTPYHLTKAVILG
QDPYHGEGQAHGLSFSVRPGVRTPPSLQNIYKEMHDDIGTPIPNQGYLVPWAEQGVLLLN
NVLTVREGQPQSHQGIGWERFTDAVIEAINEREQPVVFILWGSHAQKKASFVNTSKHLVL
KSVHPSPLAAHRGFFGSKPFSRTNAFLQEHGMEPIRWEIPSR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaatgattgggatgatgtattacgggaagaggtcgaaaaatcttactttaat
gaattaaggtacacattagcccgtgagtacaagatacacaaagtatatccccaaaaagaa
gatttgttttcagcactcaaattaacgccatatcatcttaccaaagcggttatattggga
caggacccctatcatggagagggacaagctcacggcttgagcttttccgtcagacccggt
gtgcgcacgccgccgtccctacaaaatatttacaaagagatgcacgatgatatcgggact
cccattccgaatcagggctaccttgttccttgggctgagcagggcgtgttgctgctgaac
aatgtgctgaccgtacgtgaaggacaaccgcaatctcatcagggaataggctgggaacgt
ttcacggatgctgtgattgaagcgattaatgaacgtgagcagccagtagtgtttattttg
tggggcagtcatgctcagaaaaaagcaagcttcgtgaataccagcaagcatttggtactg
aaatccgtccatccgagtccactcgcggctcaccggggattttttggcagcaaacctttt
tcgcgtaccaatgcatttttgcaggagcatggaatggaaccgatacggtgggagattcct
agccgctag
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