Paenibacillus kribbensis: B4V02_11365
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Entry
B4V02_11365 CDS
T05249
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B4V02_11365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_11365
Enzymes [BR:
pkb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B4V02_11365
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B4V02_11365
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B4V02_11365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ASR47239
UniProt:
A0A222WL72
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All DBs
Position
2501983..2502801
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AA seq
272 aa
AA seq
DB search
MPELPEMENYRTLLSKQILDIPITGVTVNREKSINTDVDTFEKHLLGATVVYLERRGKHL
IFHLNTGGRLVLHLMLGGLLYLGTEEQRPNRTVQIELDFSGVKLYFIGLRLGYLHLLTAK
ETEEALSDLGPDPLDHRMTLEKFTARLKGRRGILKTTLVNQQIFSGIGNCYSDEIAYIAG
FTPGSKVQNIVQSPEKVEKLYHATQSVLREATAEGGYIEMPLMEGDTLTGGFDHQCRVYD
REGEESPSGGKIVRVELAGKKAFYCPVQQHDA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaaatggaaaactacagaacgctattgtcaaaacaaattttggac
attccgattactggagtgacggttaaccgtgaaaaatccattaatactgacgtggacacg
tttgaaaagcatttgctgggagcgactgttgtatatttagagcgtcgaggcaagcatttg
atttttcatttaaacacgggtgggcggcttgtgctgcacctgatgctgggaggactgcta
tatctgggaacggaggagcagcgcccgaaccgtacggttcagattgaattggattttagc
ggtgtgaagctttattttattgggctgcgcttaggctacctgcacttgctgacagctaaa
gaaacagaggaggcattatcagacctcggacccgatccgttggaccatcgaatgacgttg
gaaaagttcacagcgcgtctaaagggacggcgagggattttgaaaacaacgctggtgaat
caacagattttttcggggattggcaactgttattcggatgaaattgcttatatcgccgga
tttacaccgggttccaaagtacaaaacatcgtacagtcaccggaaaaagtggaaaagctg
tatcatgctactcaatccgtgctgcgtgaagctactgcggaaggcggttatatagaaatg
ccgctgatggagggagacacattaacgggtggcttcgatcatcagtgtcgggtatatgac
cgtgagggtgaagaatccccaagtggcgggaaaattgttagggttgagctggcggggaaa
aaagcattttattgcccggtacagcagcatgatgcctaa
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