Paenibacillus kribbensis: B4V02_15105
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Entry
B4V02_15105 CDS
T05249
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pkb
Paenibacillus kribbensis
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkb03016
]
B4V02_15105
Enzymes [BR:
pkb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B4V02_15105
Transfer RNA biogenesis [BR:
pkb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B4V02_15105
Prokaryotic type
B4V02_15105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASR47920
UniProt:
A0A222WMZ9
LinkDB
All DBs
Position
complement(3417116..3418054)
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AA seq
312 aa
AA seq
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MNPMKKEQASWEGILPVLKPAGFTSHDVVAKARRLLGMKRIGHTGTLDPQVTGVLPLCLG
RATRVVEYMQERPKEYQATLRLGIATDTEDLTGTVTEESERPVEVTEVEAKATLERFVGT
ISQVPPMYSALKVNGKRLYELAREGKTVERKSREVDIYELEMTGFEQTGSYVDISFRALC
SKGTYIRTLCVDIGRALGYPSTMVKLERTMSAGISAERCLTFDEIERCVADGSLGERLIA
TDQAIDYMPEHTVAEAKAAAALQGQRLSLNMISPPVTDSQPFRLYKEDQTFLGIYGRDES
GAIAPIKVFLKL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaatgaagaaggaacaggcaagttgggaaggtattttgcccgtccttaaaccc
gctggatttacctctcatgatgtggtggcaaaggctcgccgtctactggggatgaaacgg
attggacacaccggaacgcttgatccgcaggtaaccggtgtgctgcccttgtgtctgggg
cgggctacccgagtcgttgaatacatgcaggagcggcccaaggagtatcaggccacgttg
agattaggcatagcgaccgataccgaagatcttacagggacagttactgaagaaagtgaa
cgcccagtagaggtgacggaagtagaagccaaagcgacgctggagcgatttgttggtacg
atctctcaggtgccgccgatgtattctgcgctcaaagtgaatggcaaacgtctatatgaa
ctggccagggaaggaaaaaccgtggagcgcaaaagccgcgaagtagacatttacgagctg
gagatgacaggattcgagcagacaggatcgtatgtggatatttccttccgtgccctatgc
tccaaagggacgtatatccgtacactatgtgttgatattggccgtgcgttgggatatcct
tcaacgatggtcaagctggagcgaaccatgtctgcgggaatatccgcggaacgttgcctg
acgttcgatgagatagagcgctgcgtagcggatggcagtctgggtgagcggctcattgca
accgatcaggcgattgactatatgcctgagcatacggtggccgaagcaaaggcagctgca
gctttgcaaggtcaacgtttgtcgctgaatatgatttcaccacctgtgaccgatagccag
ccctttcgtttgtataaagaggatcaaacgtttttaggcatatatggacgagatgaatca
ggtgcgatcgctccaattaaagtttttttaaaattatag
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