Paenibacillus kribbensis: B4V02_19340
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Entry
B4V02_19340 CDS
T05249
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pkb
Paenibacillus kribbensis
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkb03016
]
B4V02_19340
Enzymes [BR:
pkb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B4V02_19340
Transfer RNA biogenesis [BR:
pkb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B4V02_19340
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
VMAP-M1
Motif
Other DBs
NCBI-ProteinID:
ASR48693
UniProt:
A0A222WSN0
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All DBs
Position
complement(4334597..4335199)
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AA seq
200 aa
AA seq
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MEKDKLSNEPISSTTQSQRLFTAIAIPDEHKQKLRQWAEQDLDHLSFRKWSDFRDYHVTL
QFLGDVATSDIPQLEQALYQAAAEHAPFTLGIGGAGFFGREQFPRVLWRGVTGQRESLDQ
LYQSIVRATEPLGFKPEERPYRPHITVARSYTGQQPVPTSVWQPNDRIAEPWEVEKFVLY
ATRMGQKPMYQIIQMFPLLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggataaattatcaaatgaacctatatcatcaaccacacagtcgcaaagactt
tttacggctattgccattccagatgagcataagcagaagctgcgccaatgggcagagcag
gatttggaccatctgtccttccgaaaatggagtgatttcagagactaccatgtaacactt
cagttcttgggcgatgtggcgacttcggatattccacaactagagcaggcgttatatcaa
gctgcagccgagcatgccccgttcacgctcgggattggaggagcaggcttttttggccgc
gagcaatttccacgtgtattgtggaggggagttaccgggcagcgggagtcactggatcag
ttgtatcagtccatagttcgggctaccgaaccgctcggttttaaacctgaggaacgacct
tatcgaccccatattaccgtagcgcgttcatacacagggcagcagcccgttccgacctca
gtttggcagccaaatgatcgaattgccgagccgtgggaagtggaaaaatttgttttatat
gcaactcgaatggggcaaaaaccgatgtaccaaataattcaaatgttcccattattaagg
tga
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