KEGG   Paenibacillus kribbensis: B4V02_20625
Entry
B4V02_20625       CDS       T05249                                 
Name
(GenBank) RNA-splicing ligase RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
pkb  Paenibacillus kribbensis
Brite
KEGG Orthology (KO) [BR:pkb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pkb03016]
    B4V02_20625
Enzymes [BR:pkb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     B4V02_20625
Transfer RNA biogenesis [BR:pkb03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    B4V02_20625
 Prokaryotic type
   tRNA splicing ligases
    B4V02_20625
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: ASR48932
UniProt: A0A222WSK1
LinkDB
Position
complement(4631574..4632800)
AA seq 408 aa
MAYQEIHGVRVWGAPDTGALSQARTCAENGNVIQALLMADHHKGYSQPIGGVVVYDGQIS
PSGVGYDIGCGNKAVRTKLFAADVKPHISSIMDKIARQVSFGVGRVNAVQVDHELFDDPD
WAVYAAIGKQEHDKLKSLAREQLGTVGSGNHFVDVFIEEATGQVWIANHFGSRGFGHKTA
SGFLNLAAGRDFLGKAPGEHMDQPPVLLDMNSELGDMYYRAMRLAGRYAYAGRDYVIDQV
LGIMGTEADIVVHNHHNYAWKEQHNGRDTIVVRKGATPSAPGQMGFIGGSMGDISVIVRG
KDTVENRDSYYSTVHGAGRIMSRTQAAGKMNWKTRTRSGGQITDQQMKEAVRNYGVELRG
AGTDESPFVYRKLREVLDAHSETVEILHELKPIGVCMAGANEFDPYKD
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggcttatcaagaaatccatggcgtacgggtatggggagcgcccgatacaggagcatta
tcacaagcacgtacgtgtgcggagaatggcaatgtgattcaggcgctgctgatggcggat
catcataaaggctacagccagcccatcggcggtgtagtggtgtatgacggacaaatttcg
ccttcgggcgtcggctatgatattggctgcggaaataaagcggtaagaaccaagttgttt
gcggcagatgttaagccccacatttcatccatcatggataaaattgcacgtcaggtttcg
tttggcgtaggtcgtgtgaatgcggttcaggtcgatcatgagctgttcgatgatcccgat
tgggcggtatatgcagcgattgggaaacaggagcatgacaaactcaagtccctggcgaga
gaacaactgggtacggtaggaagcggtaatcattttgttgatgtattcatagaggaagcg
acagggcaggtctggattgcaaatcattttggcagccggggctttgggcataaaacggcg
agcggatttttaaacctggccgctggacgggattttctcggtaaagcgccgggcgagcat
atggatcagccgccagtgctgctggacatgaacagcgagctgggggacatgtattaccgt
gcgatgcggcttgccggacgttatgcttatgcgggacgtgattatgttatagatcaagtg
cttggtattatggggaccgaagcggacattgtcgtgcataatcatcataactatgcatgg
aaggaacagcataatggacgtgacacaatcgttgtccgcaaaggcgctactccttcagcc
cctggacaaatgggctttattgggggaagcatgggggatatttcggtcattgtacggggg
aaggatacggtagaaaatcgggactcctattatagtaccgttcatggagcgggtcggatt
atgagccgtacccaggcggccggtaaaatgaactggaaaacccgtacacgaagtggcggc
caaattacagaccagcagatgaaggaggccgttcggaactatggtgtcgagctgcgcgga
gcgggaacagatgaaagtccgttcgtctaccgcaagctgcgtgaggtactggacgctcat
tctgagactgtggaaattctgcatgagctgaagccgattggagtatgcatggctggggcc
aatgagttcgacccatacaaggactaa

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