Paenibacillus kribbensis: B4V02_23805
Help
Entry
B4V02_23805 CDS
T05249
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb00040
Pentose and glucuronate interconversions
pkb01100
Metabolic pathways
pkb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B4V02_23805
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B4V02_23805
Enzymes [BR:
pkb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B4V02_23805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Glyco_hydro_59_C
3keto-disac_hyd
Laminin_G_3
DUF6250
Laminin_G_1
Beta_helix
SO2946-like_C
Laminin_G_2
Motif
Other DBs
NCBI-ProteinID:
ASR49494
UniProt:
A0A222WUG0
LinkDB
All DBs
Position
complement(5335141..5337234)
Genome browser
AA seq
697 aa
AA seq
DB search
MKSDLMKKCANVMLSSSLALSLSLPLLGHAYADGSLQVSDNFEQGEAQGWKVDSGNWSVV
KGGDGFTYQQSGRSEGRSVKGDASWTNYSVQADVYVDDFNGSNRVYVAGRYTDAKNFYAA
SLYNKKGGALEIRKKVNGSMKTLATNKKYKLETNTWYKVKLELSGSEIKMYVNDKLELTA
KDSSLTAGAVGLVTSKASAQFDNVIVSGTASGGGTTTPSAKPEPGKDQPTPGTNDNATFK
NSYNLTGFSYGNTGGGNIAETDANYKKVYNAVDLHEALKKGSKVKVIEIMNDLDLGWNEM
PSAAKANPFSPHNAVQTHPVLKKTGVSKIYIQNLNGVTIFSAKGAKIKHAGFVIKNCSNL
IFRNLEFDELWEWDEATKGNYDKNDWDYITVEGASSKVWIDHCTFNKAYDGLVDVKKGSN
GVTISWSLFKGDDRSPNSWVTQQVNAMEADKSSYPMYAYLRSSAVGLSKEDIIDIAAGQK
KAHLVGATEMAADNPDLEVTLHHNYYLDIQDRMPRLRGGNAHAYNIVIDDAGLARAKKRI
TSDMAKAISAKGYHFDVVGNGAISTENGAVLLEKSYLIDVFSPVRNNQKDAKKADYTGKI
KAEDVIFSDKGTVFRGGSEEANSPLAPYPAKAIDFSWNGFTKLPYSYTAENPENLVAQLQ
GKDGAGAGKLNWSKENWLKTAYNAAVSKNVQAVEDSE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagatttgatgaaaaaatgtgcaaatgtaatgctgagcagctcgttggcgctg
tctttatcgttaccgttattaggtcatgcgtatgcagatggaagtttacaggtgagtgat
aactttgaacaaggtgaagctcaaggctggaaagtagattcggggaactggtctgttgtc
aagggaggggatggcttcacataccagcaatctggtcgaagtgaaggccgttctgttaaa
ggcgatgcttcctggacgaactatagtgtgcaagcagatgtgtatgtagacgattttaac
ggctccaaccgggtgtatgttgcaggcagatacacagatgccaaaaacttctatgcggct
tcgctgtacaacaagaagggcggggctctggaaatccgtaaaaaggtaaacggttctatg
aagacactggctaccaacaaaaagtacaagctggaaacaaatacgtggtacaaagtaaag
ctggagctgtctggttcggaaattaagatgtacgtcaatgataaactggagttgactgca
aaagactccagcctgactgcgggagctgttggcttggtaacctccaaggcatccgcccaa
ttcgataatgtgattgtatcgggtactgcctctggagggggtacaactacaccgtctgcg
aaaccggagccaggcaaagatcagccaactcctggtacgaatgacaacgcaaccttcaaa
aacagctataatttgaccggcttctcgtatggtaatacaggcggcggtaacattgcggaa
accgatgccaattacaaaaaggtttacaacgctgtggatctccacgaagcactgaaaaaa
ggcagcaaagtcaaggttattgagattatgaacgatctcgatctcggttggaatgagatg
ccaagtgctgccaaggcaaacccttttagtcctcacaatgctgtacagacacatcctgtg
ctgaagaaaacaggcgtgagcaaaatctatattcaaaacttgaatggagtcactattttc
tcggccaagggcgctaaaatcaaacatgccggcttcgtcattaaaaactgctctaatttg
attttccgtaacctcgaatttgacgagctttgggagtgggatgaagcaaccaaaggcaat
tatgacaaaaatgattgggattatattactgtcgaaggtgcaagctccaaagtatggatt
gaccattgcacattcaacaaagcctatgacggtttggtagatgtgaaaaaaggcagtaac
ggagttactatttcctggtctctgttcaaaggagatgaccgcagccccaacagctgggta
acccaacaagtcaacgccatggaagcagacaaatcctcctacccgatgtacgcttatctg
agaagcagtgccgtaggattgagtaaagaagatatcattgatattgcagcaggacaaaag
aaggcgcatctggtgggtgctacggaaatggcagccgacaatccggatctggaagtgacg
ctgcatcataattactatctggatattcaggaccgcatgccacgtttgcgtggcggtaat
gctcatgcctataacatcgttatagatgatgccggattggccagagccaaaaaaagaatt
acgtccgacatggccaaagcaatttctgccaaaggataccattttgacgtcgtaggcaac
ggtgcgatttcaactgaaaatggcgcggtactgcttgaaaaatcgtatttaattgatgta
ttttctccagttcgcaataatcagaaagatgctaaaaaagccgactatacaggtaaaatc
aaagcagaggacgtcatcttctcggataaaggcaccgtattcagaggaggcagcgaagaa
gcaaacagcccgttagctccgtatcctgcaaaggccattgatttctcctggaatgggttc
acaaaattgccatatagctatacagccgaaaatcctgaaaacctggttgctcaattgcag
ggcaaagatggagcaggtgcaggcaagctgaattggtccaaagaaaactggctcaaaaca
gcatacaatgcagccgtttcgaaaaatgtacaagcggtggaagattcagaataa
DBGET
integrated database retrieval system
