Paenibacillus kribbensis: B4V02_24245
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Entry
B4V02_24245 CDS
T05249
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pkb
Paenibacillus kribbensis
Pathway
pkb00040
Pentose and glucuronate interconversions
pkb01100
Metabolic pathways
pkb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B4V02_24245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B4V02_24245
Enzymes [BR:
pkb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B4V02_24245
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Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Beta_helix
Trypan_PARP
TonB_N
Motif
Other DBs
NCBI-ProteinID:
ASR49574
UniProt:
A0A222WUN0
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Position
complement(5425477..5427627)
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AA seq
716 aa
AA seq
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MKKRITNVMSIVLLFSLVISLIGLQGTKIYAAGLSIIDGGGWNETAYVEWSPESNAEGYN
VYVKPVNASDSYYQQIDSELIRKYPSYWRADAVGLAAGDYVMKVEARLPGGSTVSAVSKK
LSVASYDRSGFAFSSKSQYGTGSGAYNEDGTLKNGAQVLYVTSKTAQTLTLDVKINSSGR
VQKGVGLGEILALRQKGYDTTPLAIRFIGKVTEDDMKGQLNSSGYLQVKGKKNYSEMNMT
VEGIGDDAYAYGWGILLRYVGNVEVRNLGLMLFPDDGISMDTGNANVWVHNNDIFYGSAG
GDADQAKGDGSTDVKNGSTYITISYNHYWDSGKSALVGLSESSEFFVTFHHNWFDHSDSR
HPRIRVASVHIYNNFFDGVSKYGVGATMGASAFVESNYFRHAKYPMLSSLQGTDALGEGT
FSGENGGVIKAYNNSIVDAASLIYANSNNGTAPANKSSFDAYLASSRNETVPSSYKALKG
GTAYNNFDTSVDTGVNGADIDNVSDVEQIVTAKAGRLNNGDFTWEFDNSVDDTSYALNSA
LMAKIRSYTTQLVSVGGDSIPTEPTPTPISEPTPEPTPTPIPEPTPGPTPEPTPEPTPTP
VPVPTPGERVHNFTISGTNSYLFDIKGNLSANKGTVEYNGLTLTQCLKIESSTSIGFTTT
EASTLTLVFSSADGTKIKVDGTSYPITDGIVSVSLAPGAHTITKDSPTNLYYMELK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaggattacaaatgtaatgagtattgttttattgttttctcttgtaatatct
ttaataggattgcaaggtactaaaatttatgctgctggtctttcgatcatcgacggtgga
ggctggaatgaaactgcgtatgtagaatggtcacctgaaagcaatgcggagggatataat
gtatatgttaaacctgtaaacgcgtcagattcttactatcaacaaattgatagtgaatta
atccgaaaatacccttcctattggagagctgatgccgtaggtcttgcagctggagattat
gtaatgaaggttgaagccaggctgccaggcggatcaacggtaagtgctgtttcaaaaaag
ctatccgtagcgtcatatgatagatccggatttgctttctcatcaaaatcgcaatatggc
acgggctcgggtgcttataatgaagacggaacacttaagaatggtgcccaggttctttat
gtaacatccaagactgcacaaacattgaccctcgatgtgaaaatcaatagctcaggtcgt
gttcaaaaaggtgttggtctgggcgagattttggcattaagacaaaaaggctatgataca
acaccacttgcaatcagatttattgggaaagttacagaagatgacatgaaaggacaactg
aatagcagtggatatcttcaagtaaaaggcaaaaaaaattattcggaaatgaatatgacg
gttgaaggtatcggagacgatgcttatgcttacggatggggaatacttcttagatatgtc
ggaaatgtggaagtgagaaatctgggtctgatgttgttccctgatgacggtatttcaatg
gatacaggaaatgcgaatgtttgggtgcataataatgatatattctatggatctgcagga
ggagatgctgaccaagcaaagggagatggttccacagacgttaaaaatggatcgacgtat
attacaatctcttataatcactactgggattcaggaaaatcagctttggtcggcttaagt
gaatcgtcagaattctttgtcaccttccaccataactggtttgatcattcagactcccgt
catccacgtataagagtggcatctgttcatatatataataacttctttgatggagtttca
aaatatggtgtcggtgctacaatgggagcttcagcctttgtagaatctaattattttaga
catgctaaatatccaatgctgagctctttgcaaggtacggatgctttaggggaaggtaca
ttttcgggcgaaaacggaggtgtgattaaggcctacaacaatagtatagttgatgctgcc
agtctgatttatgcaaactccaataacgggacagctccggcaaataaaagctcatttgat
gcgtacttagcttcgtcgagaaatgagaccgtaccaagctcatacaaagcattaaaagga
gggacagcgtataacaactttgatacaagcgttgatactggagtaaatggtgctgacatt
gataatgtaagcgatgttgaacaaattgttactgcaaaagctggacgcctaaataacgga
gactttacatgggaatttgataattccgttgatgacacgtcgtatgcactcaattcagct
ctaatggctaaaataagaagctacacaactcaacttgtgtctgtagggggggattcaatc
ccaacggagccaacgccgactcctatttcagaaccaactccggaaccaacaccaacgcct
attccggaaccgacaccggggccaactccagaaccaaccccagaaccgacaccgactcct
gttccggtaccaacacctggagaacgggttcataactttactatatctggaactaatagt
tacttatttgatattaaagggaatctttcggcaaacaagggaactgtagagtataatggt
ttgactctaactcaatgcttaaaaatcgagagctcaaccagtattgggtttaccactacg
gaagcttcaacattaacattggtgtttagttcagcagacggaacaaaaatcaaggttgat
ggaaccagttatccaataactgatggtattgtcagcgtatcacttgctcctggcgcacat
accattacaaaagatagtcctacaaatctttattacatggaattgaaatag
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