Paenibacillus kribbensis: B4V02_25205
Help
Entry
B4V02_25205 CDS
T05249
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pkb
Paenibacillus kribbensis
Brite
KEGG Orthology (KO) [BR:
pkb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkb03032
]
B4V02_25205
03400 DNA repair and recombination proteins [BR:
pkb03400
]
B4V02_25205
Enzymes [BR:
pkb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B4V02_25205
DNA replication proteins [BR:
pkb03032
]
Prokaryotic type
DNA Topoisomerases
B4V02_25205
DNA repair and recombination proteins [BR:
pkb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B4V02_25205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ASR49735
UniProt:
A0A222WUT5
LinkDB
All DBs
Position
complement(5650450..5652360)
Genome browser
AA seq
636 aa
AA seq
DB search
MSMNQPSYDASEIQVLEGLEAVRKRPGMYIGSTSVKGLHHLVWEVVDNSIDEALAGYCNS
IQVIVHKDNSITVTDNGRGIPVSEHAKMKKSALEVVMTVLHAGGKFGGGGYKVSGGLHGV
GVSVVNALSSKVIVHVKRDGHVYEQEYHRGVPQYDVRVIGDTDETGTQTTFYPDEQIFTE
TTVYDYDTLQTRIRELAFLNKGIAISLTDERTGASDTFHYEGGISEYVQFLNQQREALHE
QPIYVEGSRDMIQVEVALQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYAR
KNGLIKDSNANLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQ
EFLEENPSVSRRVVDKSLQAARAREAARKARELTRRKSALEISSLPGKLADCSSKDASIS
ELYIVEGDSAGGSAKQGRDRHFQAILPIRGKILNVEKARLDRILSSDEIRSMVTAMGTGI
GDDFDISKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRKILDAGYVYIAQPPLFKVER
NKVIRYANSEAERDEIIREFGENAKYNVQRYKGLGEMNAAQLWETTMDPESRTMLQVTIN
DAMLADTLFNTLMGDNVEPRRDFIQEHAKYVKNLDF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaatcaaccgtcttatgatgcgagcgagattcaggtcctggagggcctggaa
gcggttcggaaacgtcccgggatgtatattggctccacgagtgtcaaaggtctccatcat
ttggtctgggaagttgtggacaacagcattgacgaagcgctggcaggttattgtaacagc
attcaggttatcgttcacaaggataatagcattaccgttacagacaacggtcgcggtatt
ccggtaagtgagcacgccaaaatgaaaaaatcagcgctggaagtcgttatgactgtactt
catgcaggtggtaaattcggaggcggagggtacaaagtctccggcggtctgcacggggtt
ggtgtatccgtagtgaatgctctatccagcaaagtgatcgttcatgtcaaacgggacgga
catgtgtatgaacaggaatatcatcgcggtgtaccgcaatatgatgtgagagttatcggt
gacacagatgagacggggacccaaacgacattttacccggatgagcaaatttttacagaa
acaaccgtatatgactatgatacgctgcaaacgcggattcgtgagttggcttttctgaat
aaagggattgccatcagcctgactgatgagcggacgggtgccagcgatacattccactac
gagggcggaatcagtgaatacgtacaatttttgaatcagcaaagagaagcacttcatgag
cagccgatttatgtcgaaggctcacgcgatatgattcaagtcgaggttgcgctgcaatat
aacgacagctacaccgaaaatatttattctttcgccaacaatatcaacacgcacgagggc
ggaacgcacgaatctggcttcaagagtgcattaacccggattattaacgattatgcacgc
aaaaacggcctgattaaggatagcaatgccaacctgactggcgatgatgtgcgtgaaggt
ctgacggcgattatctccgtcaaaattccggaaccgcaatttgagggtcagaccaaaaca
aagctcggtaacagcgaggtgcgagggattgtcgaatccctgttcgcggagaaacttcag
gaatttctggaggaaaatccatctgtttctcgccgcgtagttgataaatccttacaagca
gcacgtgcccgcgaagcagcgcgcaaagcgcgtgagctgacgcgtcgtaaaagtgcgctg
gaaatcagctctcttcccggcaagctagcggactgctcctccaaggatgcttcgattagt
gagctgtacatcgtcgaaggtgattcagcaggtggatcggccaaacagggccgtgatcgc
cacttccaagctattttgccgattcgcggtaaaatcctgaacgtggagaaggcacgtctg
gatcgcattttgtccagtgatgaaatccgctcgatggtaactgcaatgggtacagggatc
ggagacgattttgacatctccaaagcacgttaccacaaggtcattatcatgacggatgca
gatgtcgacggtgctcacattcgcacgctgctgctgacgttcttctatcggtatatgcgt
aaaattttagatgcaggctatgtttacattgcccagccaccgctgttcaaggtagagcgc
aacaaggtcatacgttatgcgaattcggaagcagagcgtgatgagatcatcagggaattt
ggggaaaatgcgaagtacaatgtacagcgctataaaggtttgggtgagatgaacgcggca
cagctatgggaaacgacgatggaccctgaaagccgtactatgcttcaggtaaccattaat
gacgcgatgctggcagatacactgttcaacaccctaatgggggataatgtagaacctcgc
cgcgactttattcaggaacatgctaagtatgtgaaaaatctcgatttttaa
DBGET
integrated database retrieval system
