Pseudomonas knackmussii: PKB_0188
Help
Entry
PKB_0188 CDS
T03081
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00260
Glycine, serine and threonine metabolism
pkc00460
Cyanoamino acid metabolism
pkc00630
Glyoxylate and dicarboxylate metabolism
pkc00670
One carbon pool by folate
pkc00680
Methane metabolism
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01120
Microbial metabolism in diverse environments
pkc01200
Carbon metabolism
pkc01230
Biosynthesis of amino acids
pkc01240
Biosynthesis of cofactors
pkc04981
Folate transport and metabolism
Module
pkc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKB_0188 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
PKB_0188 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PKB_0188 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PKB_0188 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PKB_0188 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PKB_0188 (glyA1)
Enzymes [BR:
pkc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PKB_0188 (glyA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CDF81567
UniProt:
A0A024HAM9
LinkDB
All DBs
Position
complement(206888..208141)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKHDQIQGYDDELFAALADEEARQEDHLELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGLDTKTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LARSNEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKEYQAQVIKNAKAMAE
VFIDRGYDVVSGGTDNHLMLISLVKQGLTGKEADAALGRVGITVNKNAVPNDPQSPFVTS
GIRVGTPAITTRGLKETQCRELAGWICDVLDHLGDADVEAKVATQVAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcatgaccagatccagggctacgacgacgaactcttcgccgcgctggcc
gacgaggaagcccgccaggaagaccacctggagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggcacaaggcagcggcctgaccaacaagtatgccgagggttatccg
ggcaagcgctactacggcggctgcgagcatgtcgacaaggtcgagcagctggccatcgac
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactccggctcctcg
gccaacagcgccgtctacctggccctgctgaacgctggcgacaccatcctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaggtctcgtcctctggcaagctgtac
aacgccgtgcagtacggcctggacaccaagaccgggctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgtcgccggcttctccgcctactccaag
accctcgacttcccgcgcttccgcgccatcgccgacaaggttggcgcgctgctgttcgtc
gacatggcccacgtcgccggcctggtcgccgctggcctgtacccgaacccgctgccctac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatc
ctggcgcgcagcaacgaagagatcgagaagaagctcaactccgccgtattccccggcgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggcggtgtgcttcaaggaagcgctg
gagcccggcttcaaggaataccaggcccaggtcatcaagaacgccaaggccatggctgaa
gtcttcatcgaccgcggctacgacgtggtttccggcggcaccgacaaccacctgatgctg
atcagcctggtcaagcagggcctgaccggtaaggaagcggacgccgccctcggccgcgtc
ggcatcaccgtcaacaagaacgccgtccccaacgatccgcagagccccttcgtgacttcg
ggcattcgcgtcggcaccccggccatcaccacccgtggcctcaaggaaacccagtgccgc
gagctggccggctggatctgcgacgtgctcgaccacctgggcgacgccgacgtcgaggcc
aaggtggccacccaggtcgccggcctctgcgccgactacccggtctatcgttga
DBGET
integrated database retrieval system
