Pseudomonas knackmussii: PKB_0306
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Entry
PKB_0306 CDS
T03081
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00860
Porphyrin metabolism
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01120
Microbial metabolism in diverse environments
pkc01240
Biosynthesis of cofactors
Module
pkc_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pkc_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PKB_0306 (hemD)
Enzymes [BR:
pkc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
PKB_0306 (hemD)
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GFIT
Motif
Pfam:
HEM4
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CDF81684
UniProt:
A0A024HAR8
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All DBs
Position
334182..334946
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AA seq
254 aa
AA seq
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MSRWRLLLTRPQEECAALAASLAEHGVASASLPLLAIEPLDETPEQRSLLLDLDRYCAVV
VVSKPAARLGLDRLDRYWPQPPARQAWFAVGAATAAILDDYGLSVRYPISGDDSEALLSL
PELEQALQVPDPRVLIMRGEGGREFLAERLRGQGVTVDYLELYRRTLPAYAPGELLRRVR
DEQLNALLVSSGQGLEHLIELASEDWPVLAGLPLFVPSARVAEAARQAGAQHVIDCRGAS
AAALLEALRSANKE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgctggcgcctgctgctgacgcgcccgcaggaagaatgcgcggcgctggccgcc
agcctcgccgagcacggcgtcgccagcgccagcttgccgctgttggccatcgaaccactg
gacgaaacccccgagcagcgcagccttctgctcgacctggatcgttactgcgcggtggtg
gttgtcagcaaacctgccgcgcgcctcggccttgatcgcctcgaccgctactggccacag
ccgccagcccggcaggcgtggttcgccgtgggcgctgccactgcagctatcctcgatgac
tacggtctgtccgtgcgctacccgatttcgggcgatgacagcgaggctcttctgagcctt
ccagaactggagcaggccttgcaggttcccgatccgcgagtgctcatcatgcgtggcgaa
ggtggccgagaatttctcgccgaacgcctgcgcggccaaggcgtgacggtggattatctg
gaactctaccggcgcaccctgccggcctacgcgccgggcgagctgctgcgccgcgttcgt
gacgagcagctcaatgccttgctggtgagcagcggtcaggggctggaacatctgattgag
ctggcttccgaggattggccggtgctggccggattgccgttgttcgtgcccagcgcacgc
gtggcagaggctgcgcgccaggctggtgcacagcatgtgatcgactgtcgcggggcgagc
gccgcggcactgctggaggcgctcaggagcgccaacaaagaataa
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