Pseudomonas knackmussii: PKB_0377
Help
Entry
PKB_0377 CDS
T03081
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PKB_0377 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_0377 (mutM)
Enzymes [BR:
pkc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PKB_0377 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PKB_0377 (mutM)
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PKB_0377 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
CDF81755
UniProt:
A0A024H9V1
LinkDB
All DBs
Position
411655..412467
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPYLEGQRVTRVIVRDRRLRWPIPEDLDVRLSGQRILKVERRAKYL
LLQAEAGTLISHLGMSGNLRLVECGLAPAKHEHVDIELESGLALRYTDPRRFGAMLWSQN
PLEHELLRNLGPEPLTDDFEGERLYQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGTISRARYLKLAEEIKRILAIAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEFCKVCGSTLREVRLGQRASVYCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtcgaaaccacccgccggggcatcgcgccctacctggaaggc
cagcgcgtcacccgcgtgatcgtccgcgaccggcgcctgcgctggccgattccggaagac
ctcgacgtgcgcctgtccgggcagcgcatcctcaaggtcgagcggcgcgccaagtacctg
ttgctgcaggccgaggcgggcacgctgatcagccacctgggcatgtccggcaacctgcgc
ctggtggagtgcgggctggcgccggccaagcacgagcacgtcgatatcgagctggaatcg
ggcctggcactgcgctacaccgacccgcggcgcttcggcgccatgctctggagccagaat
ccgctggagcacgagctgctgcgcaacctcgggccggagccgctgaccgacgacttcgaa
ggcgagcgcctgtaccagctctcgcgcgggcggagcatggcggtcaagccgttcatcatg
gacaacgcggtggtggtcggtgtgggcaatatctacgccacagaggcgctgttcgccgcc
ggcatcgacccgcgccgcgaagccgggaccatttctcgggcgcgctacttgaagctcgcc
gaagagatcaagcgcatcctggcgatcgccatcgagcgcggcggcaccaccctgcgcgac
ttcatcggtggcgacggccagcccggttacttccagcaggagctgttcgtctacggccga
ggcggggagttctgcaaggtctgcggcagcaccctgcgcgaagtgcgcctgggccagcgc
gccagcgtctactgtccgcgctgccaacgctga
DBGET
integrated database retrieval system
