Pseudomonas knackmussii: PKB_0395
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Entry
PKB_0395 CDS
T03081
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkc03021
]
PKB_0395 (rpoH)
Transcription machinery [BR:
pkc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PKB_0395 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
CDF81773
UniProt:
A0A024HBA4
LinkDB
All DBs
Position
429484..430338
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AA seq
284 aa
AA seq
DB search
MTNSLQPVYALVPGANLESYVHSVNSIPLLSPEQERELAERLFYQQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLSNDEVERVAESLGVEAREVREMESRLSGQD
MAFDPAADADDESAYQSPAHYLEDHRYDPARQLEEADWSDSSTASLHEALEGLDERSRDI
LYQRWLAEEKATLHDLAAKYNVSAERIRQLEKNAMNKLKGRIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattccctgcaacctgtttatgccctggttcccggtgcaaacctggaatcctac
gtgcactctgtgaacagcatcccgctgttgtcgccggagcaggagcgcgagctggccgaa
cgcctcttctaccagcaagaccttgaggcggcacggcaaatggtgctcgctcacctgcgt
ttcgtggtgcacatcgcccggagttattcgggctacggcctggcccaggccgatctgatc
caggaaggcaacgtcggcctgatgaaggccgtgaagcgtttcaacccggaaatgggtgtt
cgcctggtgtcctttgccgtgcattggatcaaggcggaaatccacgagttcatcctgcgc
aactggcggatcgtgaaagtcgcgaccaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgagcaatgacgaagtcgagcgcgtggccgag
agcctgggcgtcgaagcccgggaagtgcgcgagatggaaagtcgcctgagcggacaggac
atggccttcgacccggcggccgacgccgacgacgaaagcgcctaccagtcgccggcacac
tacctggaagaccatcgctacgacccggcacgccagttggaggaagcggactggagcgac
agctccaccgccagcctgcacgaagcgctggaaggcctggacgaacgcagccgcgacatc
ctctaccagcgttggctggccgaggagaaggcgaccctgcatgacctggcggccaagtac
aacgtgtctgccgagcgcatccgtcagctggaaaagaacgcgatgaacaagctcaagggg
cgcatcgaggcctga
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