Pseudomonas knackmussii: PKB_0419
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Entry
PKB_0419 CDS
T03081
Symbol
metC
Name
(GenBank) Cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00260
Glycine, serine and threonine metabolism
pkc00270
Cysteine and methionine metabolism
pkc00450
Selenocompound metabolism
pkc00670
One carbon pool by folate
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01230
Biosynthesis of amino acids
Module
pkc_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PKB_0419 (metC)
00270 Cysteine and methionine metabolism
PKB_0419 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PKB_0419 (metC)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PKB_0419 (metC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pkc04147
]
PKB_0419 (metC)
Enzymes [BR:
pkc01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
PKB_0419 (metC)
Exosome [BR:
pkc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PKB_0419 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CDF81797
UniProt:
A0A024HBA5
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All DBs
Position
449925..451097
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AA seq
390 aa
AA seq
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MSQDSHQPRGFATRVIHAGQAPDPSTGALMPPIYANSTYLQDSPGVHKGLDYGRSHNPTR
WALERCVADLEGGSKAFAFASGLAAISATLELLDAGSHIVSGNDIYGGTFRLFERVRRRS
AGHDFSFVDLTDLSAIEAALRPETRMVWIETPSNPLLRLADLEAIARLCRSRGILCVADN
TFASPRIQRPLELGFDVVVHSTTKYLNGHSDVIGGIAVVGDNPELAERLGFLQNAVGAIA
GPFDAFLTLRGVKTLALRMDRHCSNALELAQWLERQPQVKRVHYPGLPSHPQHELAKRQM
NGFGGVISIDLATDLAGAKRFLENVQIFALAESLGGVESLIEHPAIMTHATIPPATRAEL
GIGDGLVRLSVGVEDVEDLRADLAQALATI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggattcgcaccagccgcgcggtttcgccacgcgggtcatccacgccggccag
gcgcccgacccctccaccggcgcgctgatgccgccgatttacgccaactccacctacctg
caggacagccccggggtgcacaagggcctggactacggccgctcgcacaaccctacgcgc
tgggcactggagcgctgcgtggcggacttggaaggcggcagcaaggcgtttgctttcgcc
tcagggctggcagccatctcggccaccctggaactgctcgacgccggctcgcacatcgtt
tccggcaacgacatttatggcggcaccttccgcctgttcgagcgcgtgcggcggcgcagc
gccgggcatgacttcagcttcgtcgatctcaccgacctgtcggccatcgaggcggccctg
cggccggaaacccgcatggtgtggatcgaaaccccgagcaacccgctgctgcgcctggcc
gaccttgaggccatcgcccgcctgtgccgcagccgcggcatcctctgcgtggccgacaac
accttcgccagcccgcgtatccagcgtccgctggagctggggttcgatgtggtggtgcac
tcgacgaccaagtacctgaacggccactcggacgtcatcggcggcatcgccgtggtcggc
gacaacccggagctggccgagcgcctgggcttcctgcagaacgccgtgggcgccatcgcc
ggccccttcgacgccttcctcaccctgcgcggcgttaagacgctggccttgcgcatggat
cgccactgcagcaatgcgctggagctggcgcagtggctggagcggcagccgcaggtgaag
cgtgtgcattacccggggctgccgtcgcacccacagcacgaactggccaagcggcagatg
aacggcttcggcggggtgatatccatcgacctcgccaccgatctggctggcgccaagcgt
ttcctggagaacgtgcagatattcgccctggccgagagcctggggggcgtcgagagcctg
atcgaacacccggcgatcatgacccacgccactatcccgccggcgacccgagcggagctg
ggcattggcgatggcctggtgcggttgtcggtgggggtggaggatgtggaggacctgcgc
gccgatctggcgcaggcgctggccacgatctga
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