Pseudomonas knackmussii: PKB_0438
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Entry
PKB_0438 CDS
T03081
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkc03009
]
PKB_0438 (rsmE)
Enzymes [BR:
pkc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
PKB_0438 (rsmE)
Ribosome biogenesis [BR:
pkc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PKB_0438 (rsmE)
SSDB
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Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
CYNS_N
Motif
Other DBs
NCBI-ProteinID:
CDF81816
UniProt:
A0A024HAC6
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All DBs
Position
complement(473318..474037)
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AA seq
239 aa
AA seq
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MRLSRFFIDAPLSLGQHELPEAQAHYIGRVLRHAVGDAVQLFDGSGQEFLGELIEVGKKS
VRVELREAFAGLAESPLRIHLGQGLSRGERMDWAIQKATELGASEITPIISERCEVRLKD
ERADKRTAHWRQIAISACEQCGRSVLPQINAPITLAEWLQGVEAELKLVLHPVAEPLVSH
APPASLAFLIGPEGGLSDTEVEQARAGGFLAARLGPRVLRTETAPVVALSVAQQLWGDF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctctcccgtttcttcatcgatgctcccctctccctcggccagcacgaactgccc
gaagcccaggcccactacatcggccgcgtgctgcgccacgccgtcggcgatgctgtgcag
ttgttcgacggctccggccaggaattcctcggcgaactgatcgaagtcggcaagaagagc
gtgcgcgtggaactgcgcgaggccttcgccggcctcgccgaatcgccactgcggatccac
ctcggccagggcctgtcgcgcggcgagcgcatggactgggcaatccagaaggccaccgag
ctgggcgcctcggaaatcaccccgatcatcagcgagcgctgcgaagtgcgtctgaaggac
gaacgcgccgacaagcgcaccgcgcattggcggcagatcgcgatcagtgcctgcgagcag
tgcggccgctcggtgctgccgcagatcaacgcccccatcaccctggccgaatggctgcag
ggcgtcgaggcggaactcaagctcgtcctccacccagtcgccgagccgctggtaagccac
gcgccgccggccagcctggccttcctcatcggccccgagggcgggctgagtgacacggaa
gtcgagcaggcacgcgctggcggcttccttgcggcccgtctcggccctcgcgtactgcgc
acggagacggctccagtggtcgcgctgagcgtggcgcagcagctctggggcgacttctga
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