Pseudomonas knackmussii: PKB_0547
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Entry
PKB_0547 CDS
T03081
Symbol
lptD
Name
(GenBank) LPS-assembly protein lptD
KO
K04744
LPS-assembly protein
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkc02000
]
PKB_0547 (lptD)
Transporters [BR:
pkc02000
]
Other transporters
Pores ion channels [TC:
1
]
PKB_0547 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
OstA_2
Motif
Other DBs
NCBI-ProteinID:
CDF81924
UniProt:
A0A024HBG6
LinkDB
All DBs
Position
complement(595349..598138)
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AA seq
929 aa
AA seq
DB search
MAVNFPVFRRKFPLLVTGGLLAIQPLASSTASAAEQFSCAPSGGSWDCSSQQPAAALPPR
PQHSANAVSAGGSEAAEQTSGEAKEQLVTESSGRALKSRSADYSHLDWVPREKLTAAQLA
EVGPYCSGEYVEPVRPGMNDKTPRDEAPTYVSAKASRYEQESQVATLAGNVVLRQGSMQV
EADEANLHQAENRGELSGNVRLRDNGALIVGDHADLQLDNGEAKIDNAEYVMHQAQVRGS
ALYAKRQEDAIIQLKDGTYTRCEPGSNSWYVKGNNIKLNPATGFGTATNATLRVKDIPVF
YTPYIYFPIDDRRQSGFLPPTLSSTSDTGFTLVTPYYFNLAPNYDATLYPRYMAKRGLMM
EGDFRYLTHSSEGQFTAAYLNDSDDSRSNQPHYTDQRWLYGWKNTSGLDSRWLAQVDYTR
ISDPYYFQDLDTSLGLGSPTYVNQQGALTYRGDDFTARLNAQAYQLATVTDVTPYDRLPQ
LTLDGHLPYNPGGLNFTYGSELVRFDRNLDEDVYFDTDGNVIGQRPDVNISGLARATGDR
MHLEPGVSLPVASSYGFVTPTLKAMYTKYNLDLDSTGQAQLKGLDPAHPNYAGISFDDSP
DRSLGLAKLDSGLYFDRDTSFAGTKFRQTLEPRAMYLYVPYKNQDDLPTFDTGEFTFSYD
SLWRENRFTGKDRIGDANQLSLGATSRFIEDNGFERASISAGQIYYFSDRRVQLPGLTED
YIRNYNLANPNNQISNPDADAWRSPYALQGIYRFNHDWRLNSDYNWNPNTHHTDNGSVMF
HYQPEAEPQKVFNAGYRYRANSKVFDPNLGQFTYNSDQYKINQHDFSVIWPVVPQWSAIA
RWQFDYNQSRTLEALGGFEYDSCCWKLRLVNRYWLKYDDNEFITANSKADRGIFLQIILK
GLGGVVGNQVEGFLDQGIQGYRQREDNSM
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaacttccccgtgttccgtagaaagtttcccttactggtgaccggtggcctg
ctggctatacagccgctcgcttcctcgaccgcttccgcggccgaacaattcagctgcgcg
ccctccggcggcagctgggactgctccagccaacaaccggccgccgccctcccgccgcgc
ccgcagcacagcgccaacgccgtgagtgcaggcggcagcgaagccgccgagcaaacctcc
ggcgaagccaaggagcagctggtaaccgaaagctcgggccgcgccctcaagtcgcgcagc
gccgactatagccacctggactgggtaccgcgggagaagctgaccgccgcacaactcgcg
gaagtcggcccgtactgcagcggcgaatacgtcgagccggtccgtccgggcatgaacgac
aagaccccgcgcgacgaagcaccgacctacgtttcggccaaggcctcccgctacgagcag
gaatcccaggtcgcgacgctggccggcaacgtcgtgctgcgccagggcagcatgcaggtc
gaggccgacgaggccaacctgcaccaggccgagaaccgcggcgagctgtccggcaacgtg
cgcctgcgcgacaacggcgcgctgatcgtcggcgaccacgccgacctgcaactggacaac
ggcgaggcgaagatcgacaacgccgagtacgtcatgcaccaggcccaggtccgtggcagc
gcgctctacgccaagcgccaggaagacgccatcatccagctcaaggacggtacctacacc
cgttgcgagccgggcagcaactcctggtacgtcaagggcaacaacatcaagctgaacccg
gccaccggcttcggcaccgcgaccaacgcgaccctgcgggtgaaggacattccggtgttc
tataccccctacatctatttcccgatcgacgaccgtcgccagtccggcttcctgccgccg
accctgtcgagcacctcggacactggcttcacgctggtcacgccgtactacttcaacctg
gccccgaactacgacgccacgttgtatccgcgctacatggccaagcgcggcctgatgatg
gaaggcgacttccgttacctgacccacagcagcgaaggccagttcacagccgcctacctg
aacgacagcgacgacagccgcagcaaccagccgcactacaccgaccaacgttggctgtac
ggctggaagaacaccagcggcctggattcccgttggctggcgcaggtcgactacacccgc
atcagcgatccgtactacttccaggacctggacacctcgctgggcctcggttcgccgacc
tacgtgaaccagcagggcgcactgacctatcgcggcgatgacttcaccgctcgcctcaac
gctcaggcgtaccaactcgccaccgtcaccgacgtgaccccgtatgaccgcctgccgcag
ctgaccctcgacggccacctgccgtacaacccgggcggcctgaacttcacctacggcagc
gaactggtgcgcttcgaccgcaacctggacgaggacgtctacttcgataccgatggcaac
gtcatcggccagcgcccggacgtcaacatttccggcctggcccgcgccaccggcgaccgc
atgcacctcgagccgggcgtgagcctgccagtggcaagcagctacggcttcgtcaccccg
acgctgaaggcgatgtacaccaagtacaacctggacctggacagcaccggccaggcacag
ctgaaaggtctcgacccggcgcatccgaactatgccggcatcagcttcgacgacagcccg
gatcgttcgctgggcctggccaagctcgacagcggtctgtacttcgaccgcgacaccagc
ttcgctggcaccaagttccgccagaccctggaaccgcgcgccatgtacctgtacgtgccg
tacaagaaccaggacgacctgccgaccttcgacaccggcgaattcaccttcagctacgac
tcgctgtggcgtgagaaccgcttcaccggcaaggaccgcattggcgatgccaaccagctt
tccctcggcgcgacctcgcgcttcatcgaggacaacggcttcgagcgggcgtccatcagc
gcgggccagatctactacttctccgatcgtcgcgtgcagctccccggcctgaccgaggac
tacatccgcaactacaacctggccaacccgaacaaccagatttccaatccggatgcggac
gcctggcgctcgccctatgcactgcaaggcatctatcgcttcaaccacgattggcgcctg
aactccgactacaactggaacccgaacactcaccacaccgacaacggcagcgtgatgttc
cactaccagccggaagcggaaccgcagaaagtgttcaacgcgggctatcgctatcgcgcg
aacagcaaggtgttcgacccgaacctgggccagttcacctacaacagcgaccagtacaag
atcaaccagcacgacttctcggtcatctggccggtcgttccgcagtggagcgccatcgcg
cgctggcagttcgactacaaccagagccgtaccctcgaagcactcggcggcttcgagtac
gacagctgctgctggaagctgcgtctggtcaaccgctattggctgaagtacgacgacaac
gagttcattactgcgaactcgaaagctgaccgcggcatcttcctgcaaatcatcctgaaa
ggccttggcggcgtggtcggcaaccaagtcgaaggcttcctcgaccaaggcatccaaggc
tatcgtcaacgtgaagacaactctatgtaa
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