Pseudomonas knackmussii: PKB_0556
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Entry
PKB_0556 CDS
T03081
Name
(GenBank) putative ABC transporter binding protein subunit
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKB_0556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkc02000
]
PKB_0556
Transporters [BR:
pkc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PKB_0556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
CDF81933
UniProt:
A0A024HBS0
LinkDB
All DBs
Position
607487..608545
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AA seq
352 aa
AA seq
DB search
MSKFPSHPLKAGLQLAALSLGLAAAAQSMAATDLTVISFGGANKDAQVKAFYQPFEKATG
NKIVAGEYNGEMAKVKAMVDTKSVTWDLVEVESPELARGCDEGMFEEIDPAILGKAEDYV
PGAVSNCGVGFFVWSTVLAYNADKLKTAPTGWADFWDVKKFPGKRALRKGAKYTLEFALM
ADGVAPKDVYKVLATKEGQDRAFKKLDEIKPNIQWWEAGAQPPQYLASGDVVMSSAYNGR
IASVQKESNLKVVWNGGIYDFDAWAIPKGAKKKDDALKFIAFSVKPEQQKIYAENIAYGP
VNKNTVNLLDKGVLTNMPTTPANIEGQVGMNVGFWADYGEQLEQRFNAWAAK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagttcccgtcccatccgttgaaagccggtctgcagctcgccgcactgagtctg
ggcctggctgccgccgcgcagagcatggccgctaccgatctgaccgtgatctccttcggc
ggcgccaacaaggacgcccaggtcaaggccttctaccagcccttcgagaaagccactggc
aacaagatcgtcgccggcgaatacaacggcgagatggccaaggtgaaggccatggtcgac
accaagagcgtgacctgggacctggtcgaggtggaatcgccggagctggcccgtggctgt
gacgagggcatgttcgaggaaatcgacccggccatcctcggcaaggccgaagactacgtt
ccgggcgcggtgagcaactgcggcgtcggtttcttcgtatggtccaccgtgctggcctac
aacgccgacaagctgaagaccgctccgaccggctgggccgacttctgggacgtgaagaaa
ttccccggcaagcgcgcactgcgcaagggcgccaagtacaccctggaattcgccctgatg
gccgacggcgttgcgccgaaagacgtctacaaggtgctcgccaccaaggaaggccaggat
cgcgcgttcaagaaactcgacgagatcaagccgaacatccagtggtgggaagccggcgcc
cagccgccgcagtacctcgcttccggtgacgtggtcatgagctcggcctacaacggccgt
atcgcctcggttcagaaagaaagcaacctgaaggtcgtgtggaacggcggcatctacgac
ttcgacgcctgggccatcccgaaaggcgccaagaagaaggacgacgcgctgaagttcatc
gccttctcggtcaagcccgagcagcagaagatctacgccgagaacatcgcctacggtccg
gtgaacaagaacaccgtgaacctgctggacaagggcgttctgaccaacatgccgaccacc
ccggccaacatcgaaggccaggtgggcatgaacgtcggcttctgggctgactacggcgag
cagctggaacagcgcttcaacgcctgggccgccaagtaa
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