KEGG   Pseudomonas knackmussii: PKB_0689
Entry
PKB_0689          CDS       T03081                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc00740  Riboflavin metabolism
pkc01100  Metabolic pathways
pkc01110  Biosynthesis of secondary metabolites
pkc01240  Biosynthesis of cofactors
pkc02024  Quorum sensing
Module
pkc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PKB_0689 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PKB_0689 (ribD)
Enzymes [BR:pkc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PKB_0689 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PKB_0689 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CDF82057
UniProt: A0A024HC20
LinkDB
Position
727105..728205
AA seq 366 aa
MSAVDQAHMARALELARKGLYSTHPNPRVGCVIVKDGQVLGEGWHVRAGEPHAEVHALRQ
AGEQARGATAYVTLEPCSHFGRTPPCADALVKTGVSRVVAAMQDPNPQVAGRGLLRLAEA
GIEVSSGVLEAEARELNVGFIKRMECGLPFVRVKLAMSLDGRTAMASGESQWITGPAARR
AVQRLRARSSVVLSGADTVLLDDARLTVRPDELGLDTEQTALAAARQPLRVLVDGHLRVP
LDAPFYRAGPVLVASCAAREGFAADGRELLVVPGSDGHVDLPQLLAELGRRGVNEVLVEA
GPRLAGAFARQGLVDEYQIFVAPKLLGSSARPLLELPLEKMAEARELRILDIRAVGDDWL
VTARPA
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgagcgccgtcgaccaggcccatatggcgcgcgcgctggaactggcgcgcaaggggctc
tattcgacccatccgaatccgcgcgtcggctgcgtgatcgtcaaggacggccaggtgctc
ggcgaaggctggcacgtccgcgcaggcgaaccgcacgccgaggtccacgccctgcgccag
gccggcgagcaagcccgcggcgccaccgcctacgtgaccctggaaccctgcagccacttc
ggccgtacgccgccgtgcgccgacgccctcgtcaaaaccggcgtttcccgcgtcgtggcg
gccatgcaggaccccaacccgcaagtcgccggacgcggcctgctgcgtctggccgaggcc
ggcatcgaggtttcctccggcgtgctggaggccgaggcccgcgagctcaacgtcggcttc
atcaagcgcatggagtgcggcctgccgttcgtccgcgtgaagctggcgatgagcctggat
ggccgcaccgccatggccagtggcgagagccagtggattactggcccggccgcgcgccgt
gcggtgcagcgcctgcgtgcgcgctccagcgtggtgctctctggcgccgataccgtgctg
ctggacgacgcccgcctcaccgtgcgccccgacgagctgggcctagacaccgagcagact
gccctggccgccgcgcgtcagccgctgcgcgtgctggtcgatggccacctgcgggtgccg
ctggatgcgcctttctatcgggccgggccggtgctggtcgccagttgcgctgcgcgcgag
ggcttcgccgccgacggtcgcgagctgctcgtcgtgccgggtagcgatggccatgtcgat
ctgccgcagttgctcgccgaactgggccggcgcggtgtcaacgaggtgctggtggaagcc
ggtccgcgcctggctggcgccttcgctcgccaggggctggtggacgagtaccagatcttc
gtggcgcccaagctgctcggttccagcgcccgtccgctgctggagctgccgctggagaag
atggccgaggcgcgcgagctgcgcatcctcgacatccgggcggtgggcgacgactggctg
gtcactgcgcgtcccgcctga

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