Pseudomonas knackmussii: PKB_0836
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Entry
PKB_0836 CDS
T03081
Name
(GenBank) hypothetical protein
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PKB_0836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_0836
Enzymes [BR:
pkc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PKB_0836
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PKB_0836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
SHOCT
Motif
Other DBs
NCBI-ProteinID:
CDF82204
UniProt:
A0A024HC81
LinkDB
All DBs
Position
complement(863319..863561)
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AA seq
80 aa
AA seq
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MARKKAVDFEQSLAELQTLVERLESGELSLEDSLGAFEQGIRLTRDCQSALSQAEQKVQI
LLERDGELSEAPFDSAGDEA
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaaagccgtcgatttcgagcagtccctcgctgaactgcaaaccctggtg
gaacgcctggagagtggcgagctgtccctggaggattcgctcggtgccttcgagcagggc
atccgcctgacccgtgattgccagtcggcgctcagccaggccgagcagaaggtgcagatc
ctcctggagcgcgatggcgagctgagcgaggcgcccttcgattcggcgggcgacgaagca
tga
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