Pseudomonas knackmussii: PKB_0866
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Entry
PKB_0866 CDS
T03081
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_0866 (phrB)
Enzymes [BR:
pkc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PKB_0866 (phrB)
DNA repair and recombination proteins [BR:
pkc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PKB_0866 (phrB)
Prokaryotic type
PKB_0866 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
CDF82232
UniProt:
A0A024HCJ7
LinkDB
All DBs
Position
complement(891117..891938)
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AA seq
273 aa
AA seq
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MLPAGENEALARLEAFAEDELKRYQEVRDRPDLDGTSRLSPYLAAGVLSPRQCLHAALAN
NLGEFETGNAGAVSWINELLWREFYKHILVGFPRVSRGRAFRVDTEALPWRKAAADLEAW
QQGRTGFPIIDAAMRQLLETGWMHNRLRMLSAMFLSKNLLLDWREGERWFMRHLIDGDLA
ANNGGWQWSASTGTDAAPYFRLFNPIAQSRRFDPHGRFLRQWLPELAHLDDDAIHEPSSL
GLFAAVDYPAPMLDLGASRERVLRAFRELPKSE
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcctgccggtgaaaacgaagcactggcgcgtcttgaggccttcgccgaagacgag
ctcaagcgttaccaggaagtccgcgaccgtccggacctggacggcaccagccgcctctcg
ccctacctcgccgccggtgtgctgtcgccccgccaatgcctgcacgccgcgctggcgaac
aacctgggcgagttcgaaaccggcaacgctggcgccgtgtcctggatcaacgagctgctc
tggcgcgagttctacaagcacatcctggtcggattcccgcgcgtcagccgcggccgcgca
ttccgcgtcgacaccgaagccctgccctggcgcaaggcggcagcggacctggaagcctgg
cagcaggggcgcaccggcttccctatcatcgacgccgccatgcgccagctcctggaaacc
ggctggatgcacaaccgcctgcgcatgctcagcgccatgttcctcagcaagaacctgctg
ctcgactggcgcgaaggcgagcgctggttcatgcgccatctgatcgacggcgacctggcg
gcgaacaacggtggctggcagtggagcgcctccaccggcaccgatgcggcaccgtacttc
cgcctgttcaacccgattgcgcagtcgcgtcgcttcgacccgcacggtcgcttcctgcgc
caatggctgccggaactggcgcacctggacgacgacgccatccacgagccctccagcctc
ggcctgttcgccgctgtcgactatccggcaccgatgctcgacctgggcgccagccgcgaa
cgagtgctgcgcgccttccgcgaactccccaagagcgaatga
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