Pseudomonas knackmussii: PKB_1008
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Entry
PKB_1008 CDS
T03081
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_1008 (sbcC)
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PKB_1008 (sbcC)
Archaeal homologous recombinant proteins
PKB_1008 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
cobW
nSTAND3
AAA_15
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CDF82374
UniProt:
A0A024HCP9
LinkDB
All DBs
Position
1052727..1056167
Genome browser
AA seq
1146 aa
AA seq
DB search
MRILSLRLKNLNSLKGEWKIDFSAEPFRDNGLFAITGPTGAGKTTLLDAICLALYHRTPR
MGALSKGSNELMTRHTADCLAEVEFEVKGLRYRAFWSQRRARDKVDGALQDAKVELARID
VTGGEGEIIADKVSEKLSQVEKLTGLDFGRFTKSMLLAQGGFAAFLEANANERAELLEEL
TGTEIYGLISQRVFERTREARASLDQLRARAEGMELLSAEQRAELEAEAERLLAEEQPLG
QRQQDLQVQRRWREDLTRAEQQREQALEREAQARLALENSSADLQRLAASEPAARLQPLH
QGWSQAQQRAAQAQGALEDIQRQQRDNAEKLIRSLWQASRHALQLREQRQGALEQLVEQR
RQVQQQLAEQPQRSRLGELLGGWKVQFELREQLRGEHAGAQSRLQEASRSIESLDAQLVA
QREVMATAEQQLNDARQAETQRQQALQVLLGEGGESGLREHWQRLQQQARTLDRLEQIAD
ARQQGAAQVARLQPQLDALQQRQQQKNGEIAALRERYKTLKQQVADKEKLLEQEQRIQAL
EAYRAQLQPGEACPLCGSHEHPAIASYQALDVSQTRRDLDECKSALAALEEQGKALAGEL
ARLEAQAEQARQQLDQSHQQQQQLDADWQRLLAEQALQIADVAALNAARQAQETALAQVQ
ERLAAVDAGKAELQRATAAREASERNHGSALQQQALLQRDLENARQRLAEQQHRLAQVQA
QEEQQAGVLLAALDGFADALPNDAASWLAAREQEWRDWQKLQQRDQQLQASESEARTALG
EAETQAAQWAARWQASGEQPLPEPAPADDPQQAMKAAASALAEAQRQADALGGREQSLQA
QLEQARTQLAEGEGAWQRALAESPFADRDTFLAALLDDAERGRLVDLKARLDTALTEAIA
LRAAAEESETRLRAEPRTELALAELDEQLKALAVQLRELGQRQGEVRAQLLGDDARRASQ
QALFAEIQAQEESHDLWQRLNGLIGSSDGAKYRRFAQGLTLDHLVHLANRQLQRLHGRYQ
LARRSDGELELEVVDTWQGDVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLD
EGFGTLDGETLEVALDALDSLNASGKSIGVISHVEALKERIPVQLKVHKGVGMGYSRLDA
RFAVKP
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctcagcctgcgtctgaagaacctcaactcgctcaagggcgagtggaagatc
gacttttctgccgagccattccgcgacaacggcctgttcgccatcaccggccccaccggc
gccggcaagaccacactgctcgacgccatctgccttgcgctctaccaccgcacgccgcgg
atgggggctctttctaaaggctcgaatgagctgatgactcggcacactgcggactgccta
gccgaggttgagtttgaggtgaagggcctgcgctatcgcgcgttctggagccagcgtcgg
gcgcgcgacaaggtcgatggtgctctacaagatgccaaggttgagcttgcgcgcatcgat
gttactggaggtgagggagaaatcatcgctgacaaggtcagcgagaaattgagtcaagtc
gagaagcttaccggcctcgacttcggccgtttcaccaagtccatgctgctggcccagggc
ggcttcgccgccttcctcgaagccaacgccaacgagcgcgccgagttgctggaagaactc
accggcacggaaatctacgggctgatctcgcagcgcgtgttcgaacgcacccgcgaggcc
cgcgccagcctcgaccagctgcgcgcacgcgccgaaggcatggagctgctgagcgccgaa
cagcgcgccgagcttgaggccgaggccgagcggctgctggccgaggagcagcccctgggc
cagcgccagcaggacctgcaagttcaaaggcgctggcgcgaagacctgactcgcgccgag
cagcaacgcgagcaagcgctggagcgcgaggcccaggcacgcctggcattggaaaactcg
tccgccgacctgcaacgcctggccgccagcgagccggcggcgcgcctgcaaccgttgcac
cagggctggtcccaggcgcaacaacgcgctgcacaggcacaaggggcgctggaagatatc
cagcgccagcaacgggacaatgccgagaagcttatccgcagcctctggcaggccagccgc
catgccttgcaactccgcgagcagcggcagggcgcgttggagcagctggtcgagcagcgc
cggcaggtccagcagcaactggccgaacagccgcagcgttcgcgtctcggagaactgctg
ggcggttggaaagtgcagttcgagctgcgcgagcagctgcgcggtgagcacgccggcgcg
cagtcgcgcctgcaggaagccagccgcagcatcgagtccctcgacgcacagttggttgcg
cagcgcgaggtcatggccacggccgagcagcaactgaacgacgcacgccaggccgagacg
caacgccagcaggcgttgcaggtgctgctgggggagggcggcgagtccggcctgcgcgag
cattggcaacgtctgcaacagcaggcgcggaccctcgatcgcctggagcagatcgccgac
gctcgccagcagggcgccgcgcaggtcgcccgcctgcagccgcaactcgacgccttgcag
cagcgacagcagcagaagaacggcgaaatcgccgcgctgcgcgagcgctacaagacgctg
aagcagcaggtcgccgacaaggaaaaactgctcgaacaggagcagcgcatccaggccctg
gaggcctatcgcgcgcagctgcagccgggcgaagcctgcccgctgtgcggttcccacgag
cacccggccatcgccagctaccaggcgctggacgtctcgcagactcgccgcgatctggac
gaatgcaaatccgccctggccgcgctggaagagcagggcaaggcgctggccggtgagctc
gcgcgcctggaggcccaggccgaacaggcccgccagcagctcgaccagagtcaccagcaa
cagcagcaactcgatgccgattggcaacgtctgctcgccgagcaggccctgcagatcgcc
gacgtggccgcgctgaatgcggcacggcaggcacaggaaacggccctggcgcaggtccag
gaacggctcgccgctgtcgatgccggcaaggccgagctgcaacgcgcgactgctgctcgc
gaagccagcgagcgcaatcacggcagcgcgctccagcagcaggctctgttgcagcgcgat
ctggagaacgcccgtcagcgccttgccgagcaacaacatcgcctggcgcaggtgcaggcc
caggaagagcagcaggccggcgttctgctggccgcgctggacggctttgccgatgccttg
ccgaatgacgcggcaagctggctcgccgcgcgcgaacaggagtggcgcgactggcaaaaa
ctccagcagcgcgaccagcagttgcaggcgagcgagagcgaggcgcgcaccgcgctcggc
gaggccgaaacccaggccgcgcagtgggcggcacgttggcaggccagcggcgagcaaccg
ctgccggagccggcgcccgccgatgatccacagcaagcaatgaaagcagcggccagtgcc
ctggccgaggcccagcgccaggccgatgccctgggcggtcgcgagcagagcctgcaagcc
caactggagcaggcgcgtacccaactggcggaaggcgagggcgcctggcagcgtgccctg
gcggaaagccccttcgccgatcgggataccttcctggctgcgctgctggacgacgcagaa
cgtgggcgtctggtcgatctcaaggcgcgcctcgacactgcgctgaccgaagccatcgcc
ttgcgcgcggcggccgaggaaagcgagacacggctgcgcgccgagccgcgcaccgaactg
gcgttggccgagctggacgagcagctgaaggccctcgccgtacaacttcgcgaactcggc
cagcgccagggcgaagtgcgcgcgcaattactgggcgacgacgcgcggcgtgccagccag
caggcgctgttcgcggagatccaggcgcaggaggaaagccacgacctctggcagcgtctg
aacggtttgatcggctcgtccgatggcgccaagtaccggcgcttcgcccagggcctgacc
ctcgatcatctggtgcatctcgccaaccgacaattgcagcgcctgcacgggcgctatcaa
ctggcgcggcgcagcgacggcgagctggagctggaagtggtcgacacctggcagggcgac
gtcgcccgcgactgccgcacgctgtccggtggcgagagcttcctggtcagcctggcgctg
gccctggcgctgtccgacctggtcagccacaagaccagcatcgattcgctgttccttgac
gaaggcttcggcaccctcgacggcgagacgctggaagtcgcgctggatgccctcgacagc
ctcaacgcgagtggcaagagcatcggcgtgatcagccacgtcgaggcgctcaaggaacgc
atcccggtgcagctcaaggtgcacaagggcgtgggcatgggctacagccggctggatgcg
cgctttgcggtgaagccctga
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integrated database retrieval system