Pseudomonas knackmussii: PKB_1208
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Entry
PKB_1208 CDS
T03081
Symbol
ygdL
Name
(GenBank) hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkc03016
]
PKB_1208 (ygdL)
Transfer RNA biogenesis [BR:
pkc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PKB_1208 (ygdL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
3HCDH_N
Pyr_redox_2
NAD_binding_7
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
CDF82573
UniProt:
A0A024HDL8
LinkDB
All DBs
Position
1269552..1270358
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AA seq
268 aa
AA seq
DB search
MLVDQERFGGIARLYGTQGLERLAAAHVAVVGIGGVGSWAAEALARSGVGEISLFDLDDV
CVTNTNRQVHALDGSVGKPKVEVMAERIRAINPQCKVHAVADFVTRETMAEYITTELDFV
IDCIDSVAAKAALIAWCKRRKIQVVTTGGAGGQVDPTQIQIADLNKTFNDPLAAKVRSTL
RRDYNFSRTPGRHYSVPCVFSTEQLRYPKPDGSVCQTKSFVGEGVKLDCAGGFGAVMMVT
ATFGMAAAARAVDKLVAGTRRPSERRAG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgctagtggaccaagagcgattcggcggtatcgcccgcctgtatggcacccaggggctc
gagcgcctggccgccgcccatgtggcggtggtcggcatcggcggcgtcggctcctgggcg
gccgaggcgctggcgcgcagcggcgtcggcgagatatcgctgttcgacctggacgacgtc
tgcgtgaccaacaccaaccgccaggtacacgcgctggacggttccgtgggcaagcccaag
gtagaggtgatggccgagcgcatccgggccatcaacccgcagtgcaaggtgcatgcggtg
gcggacttcgtcacccgcgagaccatggccgagtacatcactaccgagctggacttcgtc
atcgactgcatcgacagcgtggccgccaaggccgcgctgatcgcctggtgcaagcgacgc
aagatccaggtggtgaccaccggcggcgccggcggccaggtcgacccgacgcagatccag
atcgccgacctgaacaagaccttcaacgatccgctcgcggccaaggtccgttcgacgctg
cgtcgcgactacaacttctcgcgcacgccgggccgccactacagcgtgccttgcgtgttc
tccaccgagcagctgcgctatcccaagcccgacggcagcgtctgccagaccaagagcttc
gtcggcgaaggcgtgaagctcgactgcgccggcggtttcggcgcggtgatgatggtcacg
gccaccttcggcatggctgcggcggcgcgggctgtggataagttggtggccggtactcgc
aggccgtcggagcggcgcgcggggtaa
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