Pseudomonas knackmussii: PKB_1246
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Entry
PKB_1246 CDS
T03081
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkc03016
]
PKB_1246 (truD)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PKB_1246 (truD)
Transfer RNA biogenesis [BR:
pkc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PKB_1246 (truD)
Prokaryotic type
PKB_1246 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CDF82611
UniProt:
A0A024HCQ3
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All DBs
Position
1311153..1312211
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AA seq
352 aa
AA seq
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MTELELLGPRAHGEPCGQAVLKAVAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRLARAAGVSQRMISYAGLKDRQALTRQWFSLHLPGKADPDLTAAEDDSLRILQRTRHQR
KLQRGAHSANGFCLRLTQLSADKAALEERLQRIAREGVPNYFGSQRFGHDGGNVVDARSC
AERGILPEQRNLRSRMLSAGRSFLFNQVLAQRVAEGDWNRARVGDLLAFTDSRSFFPAGE
AECADPRLAILDLHPTGPLWGKGASPAAGRTAEQENAIGADEMALCQWLGDADLVHERRI
LRLPIQSLAWHYPGPDILQLEFVLPAGCFATVVVRELVDLIPAGQMENPCAY
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctggaactgctgggccctcgcgcccatggcgaaccctgcgggcaggcagtg
ctcaaggccgtggccgaggacttccaggtcgacgaggtgctggacatcccgctatccggt
gatggcgagcacctctggctgtgggtcgaaaaacgcgggctgaacaccgaggaagcggct
cgccgcctggcccgcgccgccggcgtctcgcaacggatgatcagctacgccgggctcaag
gatcgccaggcgctgacccggcagtggttcagcctgcacctgccgggcaaggccgatccc
gatctgaccgccgccgaagatgattcgctgcgcatcctccagcgcacccggcaccagcgc
aagctgcagcgcggcgcccattcggccaatggtttctgcctgcgcctgacccagctgagc
gccgacaaggcagcgctggaagagcgcctgcagcgcatcgctcgcgaaggcgtgcccaac
tacttcggcagccagcgctttggtcatgacggcggcaacgtcgtcgatgcgcgcagttgt
gccgagcgcggcatccttccggagcagcgcaatctgcgctcgcgaatgctctcggccgga
cgcagcttcctcttcaatcaggtgcttgcccaacgggtggccgagggggactggaatcgc
gcccgagtcggcgacctgctggccttcaccgacagccgtagcttcttcccggcaggcgag
gcggaatgcgccgatccgcgcctggctattctggacctgcatccgacggggccgctctgg
ggcaagggcgcgtcgcctgctgccggccggaccgccgagcaggagaatgccatcggcgct
gacgaaatggcactttgccaatggctgggcgatgcggacctggtgcacgaacggcgtatc
ctgcgcctccccatccagagtctggcatggcattatcccggccctgacattctgcaactg
gaattcgtcctgccggcaggctgcttcgccaccgtcgtcgtgcgcgagctggtcgatctg
ataccggcggggcagatggaaaacccatgcgcatattga
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