KEGG   Pseudomonas knackmussii: PKB_1421
Entry
PKB_1421          CDS       T03081                                 
Symbol
rnc
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PKB_1421 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pkc03019]
    PKB_1421 (rnc)
   03009 Ribosome biogenesis [BR:pkc03009]
    PKB_1421 (rnc)
   03036 Chromosome and associated proteins [BR:pkc03036]
    PKB_1421 (rnc)
Enzymes [BR:pkc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     PKB_1421 (rnc)
Messenger RNA biogenesis [BR:pkc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PKB_1421 (rnc)
Ribosome biogenesis [BR:pkc03009]
 Eukaryotic type
  90S particles
   RNase
    PKB_1421 (rnc)
 Prokaryotic type
  rRNA processing factors
   PKB_1421 (rnc)
Chromosome and associated proteins [BR:pkc03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     PKB_1421 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DUF6961
Other DBs
NCBI-ProteinID: CDF82783
UniProt: A0A024HE87
LinkDB
Position
1467883..1468572
AA seq 229 aa
MSNTLDRLERKLGYTFKDQDLMVLALTHRSFAGRNNERLEFLGDAILNFVIGEALFTHFP
QAREGQLSRLRARLVKGETLALLARGFELGDYLRLGSGELKSGGFRRESILADAMEALIG
AIYLDTGMDSARERILAWLGPQLRELTPVDTNKDPKTRLQEFLQSRACDLPRYDVVDIQG
EPHCRTFFVECEVALLNDKTHGHGGSRRIAEQVAAAAALVALGVENGHD
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcaataccctggaccgactcgagcgcaagctcggctacaccttcaaggaccaggac
ctgatggtcctggccctgacccaccgcagcttcgccgggcgcaacaacgagcgcctggag
ttccttggcgacgccatcctcaacttcgtcatcggcgaggcgctgttcacccacttccct
caggcccgcgaggggcagctgtcgcgcctgcgcgcgcggctggtcaagggcgagaccctg
gccttgctggcccgtggtttcgagctgggcgactacctgcgcctgggttccggcgaactg
aagagcggcggcttccgtcgcgagtcgattcttgccgacgccatggaagcgctgatcggt
gccatctacctggacactggcatggattccgcgcgcgagcgcatcctcgcctggctcggc
ccgcaactgcgcgagctgaccccggtagataccaacaaggacccgaaaacgcgcctgcag
gagttcctgcaatcgcgtgcctgcgatctgccgcgctacgacgtggtggatatccagggc
gaaccgcattgccggaccttcttcgtcgagtgcgaagtggccctgctgaacgacaagacc
cacggtcatggcggcagtcgccgcatcgccgagcaggtggctgccgccgccgctctggtg
gccctgggcgtggagaatggccatgactga

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