Pseudomonas knackmussii: PKB_1421
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Entry
PKB_1421 CDS
T03081
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PKB_1421 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkc03019
]
PKB_1421 (rnc)
03009 Ribosome biogenesis [BR:
pkc03009
]
PKB_1421 (rnc)
03036 Chromosome and associated proteins [BR:
pkc03036
]
PKB_1421 (rnc)
Enzymes [BR:
pkc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PKB_1421 (rnc)
Messenger RNA biogenesis [BR:
pkc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PKB_1421 (rnc)
Ribosome biogenesis [BR:
pkc03009
]
Eukaryotic type
90S particles
RNase
PKB_1421 (rnc)
Prokaryotic type
rRNA processing factors
PKB_1421 (rnc)
Chromosome and associated proteins [BR:
pkc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PKB_1421 (rnc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DUF6961
Motif
Other DBs
NCBI-ProteinID:
CDF82783
UniProt:
A0A024HE87
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All DBs
Position
1467883..1468572
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AA seq
229 aa
AA seq
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MSNTLDRLERKLGYTFKDQDLMVLALTHRSFAGRNNERLEFLGDAILNFVIGEALFTHFP
QAREGQLSRLRARLVKGETLALLARGFELGDYLRLGSGELKSGGFRRESILADAMEALIG
AIYLDTGMDSARERILAWLGPQLRELTPVDTNKDPKTRLQEFLQSRACDLPRYDVVDIQG
EPHCRTFFVECEVALLNDKTHGHGGSRRIAEQVAAAAALVALGVENGHD
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaataccctggaccgactcgagcgcaagctcggctacaccttcaaggaccaggac
ctgatggtcctggccctgacccaccgcagcttcgccgggcgcaacaacgagcgcctggag
ttccttggcgacgccatcctcaacttcgtcatcggcgaggcgctgttcacccacttccct
caggcccgcgaggggcagctgtcgcgcctgcgcgcgcggctggtcaagggcgagaccctg
gccttgctggcccgtggtttcgagctgggcgactacctgcgcctgggttccggcgaactg
aagagcggcggcttccgtcgcgagtcgattcttgccgacgccatggaagcgctgatcggt
gccatctacctggacactggcatggattccgcgcgcgagcgcatcctcgcctggctcggc
ccgcaactgcgcgagctgaccccggtagataccaacaaggacccgaaaacgcgcctgcag
gagttcctgcaatcgcgtgcctgcgatctgccgcgctacgacgtggtggatatccagggc
gaaccgcattgccggaccttcttcgtcgagtgcgaagtggccctgctgaacgacaagacc
cacggtcatggcggcagtcgccgcatcgccgagcaggtggctgccgccgccgctctggtg
gccctgggcgtggagaatggccatgactga
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