Pseudomonas knackmussii: PKB_1570
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Entry
PKB_1570 CDS
T03081
Symbol
cobD
Name
(GenBank) Cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00860
Porphyrin metabolism
pkc01100
Metabolic pathways
pkc01240
Biosynthesis of cofactors
Module
pkc_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PKB_1570 (cobD)
Enzymes [BR:
pkc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
PKB_1570 (cobD)
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Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
CDF82931
UniProt:
A0A024HDG3
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All DBs
Position
1612585..1613523
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AA seq
312 aa
AA seq
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MSLALLSVLGVSLDSLLGEPKRWHPLVAFGRFANRLERRFNGPRDGLAADAPGLGWRSHG
VTAWALAVLPLTLIVWMLTFIPHLGWLVEAVALYAAIGLRSLGEHAEPVARALRQGDLPE
ARLRVGYMVSRETAELDASAVAKAATESVLENGSDAVFAALFWFAVAGAPGVVLYRLSNT
LDAMWGYRNPRFERFGWAAAKIDDVLNFIPARLVALTYALLGNTRLALRSWREQAPQWDS
PNAGPVMAAGAGALGVQLGGNAVYHGELHERPQLGAGSAPGAGDIWRALALVRQGVLLWL
LAILGAGVLLHA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggcccttttgagcgtattgggcgtgtccctggacagcctgctgggcgagccg
aagcgctggcacccgctggtcgccttcggtcgtttcgccaatcgcctggaacgccgtttc
aacggcccgcgcgatgggctcgcagcagacgcgcccggccttggctggcgcagccatggc
gtcaccgcctgggcgcttgccgtgctgcctctgacgctgatcgtctggatgctcaccttc
attccgcacctcggctggctggtcgaggccgttgccttgtatgccgccatcggcctgcgc
agcctgggcgagcacgccgagccggtggcacgggcgctgcgccagggcgatctgcccgag
gcgcgcctgcgtgtgggctatatggtcagccgcgaaaccgccgagttggatgccagcgcg
gtggccaaggcagcgaccgagtccgtgctggagaacggcagcgatgcggtcttcgctgcg
ctgttctggttcgcggtggccggtgcgccgggcgtggtgctctatcgcctgagcaatacc
ctcgacgccatgtggggctaccgcaacccgcgcttcgagcgcttcggctgggcggcggcg
aagatcgacgatgtcctcaatttcattccggcgcgactggtggcgctgacctacgcactg
cttggcaacacccgcctggccctgcgcagctggcgcgaacaggcgccgcaatgggacagc
cccaacgccggcccggtgatggctgccggagccggtgcgctcggcgtgcagctgggcggc
aatgccgtctaccacggcgaactgcacgagcgtccgcagctgggcgccggctccgcgccg
ggcgctggtgacatctggcgcgcgctggcgctggtgcgccagggcgtgctgctctggctg
ctggcgatcctcggcgcgggagtgctgctgcatgcttga
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