Pseudomonas knackmussii: PKB_1683
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Entry
PKB_1683 CDS
T03081
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02020
Two-component system
pkc02025
Biofilm formation - Pseudomonas aeruginosa
pkc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PKB_1683 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PKB_1683 (fliA)
09142 Cell motility
02040 Flagellar assembly
PKB_1683 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkc03021
]
PKB_1683 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pkc02035
]
PKB_1683 (fliA)
Transcription machinery [BR:
pkc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PKB_1683 (fliA)
Bacterial motility proteins [BR:
pkc02035
]
Flagellar system
Flagellar assembly proteins
Stator
PKB_1683 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
MarR_2
HTH_AsnC-type
Phage_terminase
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
CDF83041
UniProt:
A0A024HDS9
LinkDB
All DBs
Position
1732907..1733626
Genome browser
AA seq
239 aa
AA seq
DB search
MYTKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLEAAKKYDSG
KGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEARTGRDAKDQEVAA
ELNMSLDDYYAILSDTQGSRLYSFDDLLQEGAQGPAEDTSHLDNEPSHGLEDERFQAALA
DAITKLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRARLSEWRAH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgaaagcacaggcgcagaactcccaggaacagctgatccagcgttacgcaccg
ctggtgaagcggatcgcctaccacctgctgggccgcctgccggccagcgtgcaggtcgag
gacctgatgcaggccggcatgatcggcctgctcgaggcggcgaagaaatacgactccggc
aagggcgcgagcttcgagacgtacgcgggcatccgcatccgcggcgccatgctcgacgaa
gtgcgcaagggcgattgggcaccgcgttcggtgcatcgcaacacgcggatggtcagcgac
gcgatccgtgccatcgaagcgcgcaccggacgcgacgctaaagatcaggaagttgctgcc
gaactcaatatgagtctcgacgattactacgcgatcttgagcgacacccagggcagtcgc
ctgtacagcttcgacgacctgttgcaggaaggggcccaggggccggcggaagacacctcg
cacctggacaacgaaccctcccacggtctggaggacgagcgtttccaggcggcgctggcc
gatgccatcaccaagcttcccgagcgcgagcgcctggtgctggcgctgtactacgacgaa
gagctcaacctcaaggagatcggcgaggtgctcggggtcagcgagtcgcgggtcagccag
ttgcatagccagtgcgcagcgcgcctgcgggcaaggttgtcggagtggcgcgcgcactaa
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integrated database retrieval system
