KEGG   Pseudomonas knackmussii: PKB_1786
Entry
PKB_1786          CDS       T03081                                 
Symbol
dapF1
Name
(GenBank) Diaminopimelate epimerase 1
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc00300  Lysine biosynthesis
pkc00470  D-Amino acid metabolism
pkc01100  Metabolic pathways
pkc01110  Biosynthesis of secondary metabolites
pkc01120  Microbial metabolism in diverse environments
pkc01230  Biosynthesis of amino acids
Module
pkc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PKB_1786 (dapF1)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PKB_1786 (dapF1)
Enzymes [BR:pkc01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PKB_1786 (dapF1)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: CDF83144
UniProt: A0A024HEV9
LinkDB
Position
complement(1834579..1835412)
AA seq 277 aa
MRFLKYHALGNDYLVYAGSEPFPFNDAAVVRICDRHRGLGSDGILVPEGRDAGAFGLRIL
NPDGSLAERSGNGLRIFSRYLWDQGLVDEQPFRIVTVAGPVTSQVFDQGREVEVDMGHAQ
FASAAIPVRVDTPQALDIPLQLDGHDLRLNAVSMGNPHCVVFVEHTEAQLAKTLGPLLES
HALFPNRTNVQFVQVLGRNDLRVEIWERGAGYTLASGTSSCAAAAVARLKGYCDSEITVH
LAGGLLRIRVEDDYRVHMRGAVQRIGELHLDAECLRD
NT seq 834 nt   +upstreamnt  +downstreamnt
atgcgcttcctcaagtaccacgccctgggcaacgactacctggtctacgccggcagcgag
cccttccccttcaatgacgcagcggtcgtgcgcatctgcgaccgccatcgcggcctgggc
tcggacggcatcctcgtccccgagggccgcgacgccggcgccttcggcctgcgcatcctc
aatcccgacggctcgctcgccgagcgcagcggcaacggcctgcgcatcttctcccgctac
ctgtgggaccagggtctggtggatgaacagccgttccgcatcgtcaccgtggccgggccg
gtcaccagccaggtgttcgaccagggccgcgaggtcgaggtggacatgggccacgcgcag
ttcgccagcgccgccatcccggtgcgggtcgacaccccgcaggcgctggacattccgctg
caactggacggccacgacctgcgcctgaacgcggtctccatgggcaatccgcattgcgtg
gtcttcgtcgaacacaccgaggcgcaactggcgaaaacactggggccgctgctggaatcc
catgcgctgttccccaaccgcaccaacgtgcagttcgtccaggtgctcgggcgcaacgac
ctgcgcgtggaaatctgggagcgcggcgccggctacaccctcgcttcgggcaccagcagc
tgcgcggcggcggccgtggcccggctgaaaggctactgcgacagcgagattaccgttcac
ctggccggcggcctgctgcgcatccgggtcgaggacgactatcgcgtgcatatgcgtggc
gccgtgcagcgcatcggtgaactgcatctggatgcggagtgcctgcgtgactga

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