Pseudomonas knackmussii: PKB_1920
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Entry
PKB_1920 CDS
T03081
Name
(GenBank) putative 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00071
Fatty acid degradation
pkc00280
Valine, leucine and isoleucine degradation
pkc00310
Lysine degradation
pkc00362
Benzoate degradation
pkc00380
Tryptophan metabolism
pkc00410
beta-Alanine metabolism
pkc00640
Propanoate metabolism
pkc00650
Butanoate metabolism
pkc00907
Pinene, camphor and geraniol degradation
pkc00930
Caprolactam degradation
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01120
Microbial metabolism in diverse environments
pkc01200
Carbon metabolism
pkc01212
Fatty acid metabolism
Module
pkc_M00087
beta-Oxidation
pkc_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PKB_1920
00650 Butanoate metabolism
PKB_1920
09103 Lipid metabolism
00071 Fatty acid degradation
PKB_1920
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PKB_1920
00310 Lysine degradation
PKB_1920
00380 Tryptophan metabolism
PKB_1920
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PKB_1920
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PKB_1920
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PKB_1920
00930 Caprolactam degradation
PKB_1920
Enzymes [BR:
pkc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PKB_1920
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PKB_1920
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PKB_1920
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
Rab_bind
2-Hacid_dh_C
F420_oxidored
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
CDF83270
UniProt:
A0A024HDY2
LinkDB
All DBs
Position
1968214..1970358
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AA seq
714 aa
AA seq
DB search
MTEAIRYEKDQDNIVVLTMDMPGQSANTMNGVYREAMAATVARLEAEKDSIAGVILTSAK
KTFFAGGDLNELIKVTKADAQAFYEGILVLKGQLRRLETLGKPVVAAINGAALGGGWEIC
LACHHRIALNESHVQLGLPEVTLGLLPGGGGVVRMVRLLGLEKALPYLAEGKKVRPEQAL
KAGLIHQIASDRDDMLAKAREWIAANPAAKQPWDTAGYKIPGGTPSSPNVAQMLAIAPSV
LRDKTKGCFPAPEKIMCAAVEGAQVDFDTAQLIEARYFTELTTGQVAKNMIGTFWFQLNE
INAGMSRPQGHPAYVTKKVGVLGAGMMGAGIAYVSAAAGIEVVLKDVSIEAAENGKAYSA
GLLEKKVGKGQMTAEKRDAFLARIKPTASDSDFEGCDLIIEAVFEDRALKAKVTAAAESA
ALADAVIASNTSTLPITGLAQAVAQPQKFIGLHFFSPVDKMPLVEIIRGEKTDDATLARA
FDYVLQIKKTPIVVNDSRGFFTSRVFGTFTNEGLAMLGEGVPAAMIENQARQAGMPVGPL
AISDEVSLSLMSHIREQTRKDLQAEGKALPQHPAFAVVDLMLNEYKRPGKAAGGGFYDYP
ANGKKHLWPELKQRFEKADRMIPAEDVRDRILFVQAIETVRCVEEGVLTSTADANIGSIF
GIGFAAWSGGALQYINQYGLKDFIARAQYLAEQYGERFEPPALLREKAARGETF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagccatccgctacgaaaaagatcaggacaacatcgtcgtcctgaccatggac
atgcccggccagagcgccaacaccatgaacggcgtctaccgcgaagccatggccgccact
gtcgcccgcctggaagccgagaaggattccatcgccggggtgatcctcacctccgccaag
aaaaccttcttcgccggcggcgacctcaacgaactgatcaaggtcaccaaggccgacgcc
caggcgttctatgaaggcatcctggtcctcaagggccagctgcgtcgcctggaaaccctc
ggcaagccggtggtcgccgccatcaacggcgccgccctgggcggtggctgggaaatctgc
ctggcctgccaccaccgcatcgcgctgaacgaaagccatgtgcagctcggcctgccggaa
gtcaccctgggcctgctgcccggtggcggcggcgtagtgcgcatggtgcgtctgctcggc
ctggagaaggccctgccgtatctcgccgaaggcaagaaggtgcgcccggagcaggcgctc
aaggccggtctgatccatcagatcgccagcgaccgcgacgacatgctggccaaggcccgc
gaatggatcgccgccaaccctgcggccaagcagccgtgggacaccgccggctacaagata
cccggcggtacgccgtccagcccgaacgtggcgcagatgctcgccatcgccccgagcgtg
ctgcgcgacaagaccaagggctgcttcccggcgccggagaagatcatgtgcgccgccgtc
gagggcgcccaggtcgacttcgacaccgcgcaactgatcgaagcgcgctacttcaccgag
ctgaccaccggccaggtggcgaagaacatgatcggcactttctggttccagctgaacgag
atcaacgccggcatgtcgcgcccgcagggccatcctgcctatgtcacgaagaaggtcggc
gtgcttggcgccggcatgatgggcgcgggcatcgcctatgtctcggcggccgccggcatc
gaggtggtgctcaaggacgtttccatcgaagcggcggagaacggcaaggcctactcggcc
gggctgctggagaagaaggtcggcaagggccagatgaccgccgagaagcgcgacgccttc
ctcgcccgcatcaagccgaccgcgagcgattccgacttcgaaggctgcgacctgatcatc
gaagcggtcttcgaggaccgcgcgctcaaggccaaggtcaccgccgcggcggagagcgcc
gccctggccgatgcagtcatcgcctccaacacctcgaccttgccgatcaccggcctggcc
caggccgtggcgcaaccgcagaagttcatcggcctgcacttcttcagcccggtggacaag
atgcctttggtggagatcatccgcggcgagaagaccgacgacgccaccctggcgcgcgcc
ttcgactacgtcctgcagatcaagaagacccccatcgtggtcaacgacagccgcggcttc
ttcacctcgcgggtgttcggcaccttcaccaacgaaggcctggccatgctcggcgagggc
gtgccggcggcgatgatcgagaaccaggcgcgccaggccggcatgccggtggggccgctg
gcgatcagcgacgaagtctcgctgagcctgatgagccacatccgcgagcagacccgcaag
gacctgcaagccgaaggcaaggcgttgccgcagcacccggcgttcgccgtggtcgacctg
atgctcaacgagtacaagcgccccggcaaggcggcgggcggcggcttctacgactatccc
gccaacggcaagaagcacctctggccggagctgaagcagcgcttcgagaaggccgaccgg
atgatcccggccgaagacgtgcgcgaccgtatcctctttgtccaggccatcgagacggtg
cgttgcgttgaggagggcgtgctgacgtccaccgccgacgccaatatcggctcgatcttc
ggcatcggtttcgctgcctggagcggcggtgcgctgcagtacatcaaccagtacgggctc
aaggacttcatcgctcgcgcgcagtaccttgcagagcagtacggcgaacgcttcgagccg
ccggcgctgctgcgcgagaaggcggcgcgcggggaaaccttctga
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