Pseudomonas knackmussii: PKB_2002
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Entry
PKB_2002 CDS
T03081
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03030
DNA replication
pkc03430
Mismatch repair
pkc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PKB_2002 (dnaQ)
03430 Mismatch repair
PKB_2002 (dnaQ)
03440 Homologous recombination
PKB_2002 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkc03032
]
PKB_2002 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_2002 (dnaQ)
Enzymes [BR:
pkc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PKB_2002 (dnaQ)
DNA replication proteins [BR:
pkc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PKB_2002 (dnaQ)
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PKB_2002 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CDF83349
UniProt:
A0A024HFE1
LinkDB
All DBs
Position
2057322..2058065
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AA seq
247 aa
AA seq
DB search
MRSVVLDTETTGMPVTDGHRIIEIGCVELEGRRLTGRHFHVYLQPDREVDEGAIAVHGIT
NDFLKDKPRFREVADEFFEFITGAQLIIHNAAFDVGFINNEFALLGQSERAEVTDYCSVL
DTLLMARERHPGQRNNLDALCKRYGVDNSGRDLHGALLDAEILADVYLAMTGGQTSLSLA
GQGAEGDGSGRPQVSAIRRLAAERGLTRVIRASDEELAAHAARLAAIEKSAGGPSLWAQL
EASAPQE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgtcgtactggataccgaaaccaccggcatgccggtgaccgatggccaccgg
atcatcgagatcggctgcgtcgaactggaagggcgacgcctgaccggtcgtcatttccac
gtctatctgcagccggatcgcgaagtcgacgaaggtgccatcgcggtccacggcatcacc
aatgatttcctcaaagacaagccgcgcttccgcgaagtcgccgacgagttcttcgagttc
atcaccggtgcgcagctgatcatccacaacgcagcgttcgacgtcggcttcatcaacaac
gaattcgccctgctggggcagagcgagcgcgccgaggtcaccgactattgctcggtactc
gacaccctgctgatggcgcgtgagcgccacccgggccagcgcaacaacctcgatgccctg
tgcaaacgctatggcgtcgacaactccggccgcgacctgcacggcgcattgctcgacgcc
gagatcctcgccgacgtctacctggcaatgaccggcgggcagaccagcctgtcgctggcc
ggccagggcgccgagggcgacggcagtgggcgtccccaggtcagcgccattcgccgcctg
gctgccgagcgtggcctgacccgggtcattcgtgccagcgacgaagagctcgcggcgcat
gccgcgcgtctggcggcgatcgagaaatccgccggcgggccgtcgctttgggcgcaactg
gaggcttccgctccacaggagtaa
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