Pseudomonas knackmussii: PKB_2331
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Entry
PKB_2331 CDS
T03081
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00260
Glycine, serine and threonine metabolism
pkc00460
Cyanoamino acid metabolism
pkc00630
Glyoxylate and dicarboxylate metabolism
pkc00670
One carbon pool by folate
pkc00680
Methane metabolism
pkc01100
Metabolic pathways
pkc01110
Biosynthesis of secondary metabolites
pkc01120
Microbial metabolism in diverse environments
pkc01200
Carbon metabolism
pkc01230
Biosynthesis of amino acids
pkc01240
Biosynthesis of cofactors
pkc04981
Folate transport and metabolism
Module
pkc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PKB_2331 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
PKB_2331 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PKB_2331 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PKB_2331 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PKB_2331 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PKB_2331 (glyA1)
Enzymes [BR:
pkc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PKB_2331 (glyA1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CDF83678
UniProt:
A0A024HGV8
LinkDB
All DBs
Position
complement(2427783..2429036)
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AA seq
417 aa
AA seq
DB search
MFSKHDQIQGYDDELFAALADEEARQEDHLELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGLDTKTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LARSNEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIKNAKAMAA
VFIDRGYDVVSGGTDNHLMLISLVKQGLTGKEADAALGRVGITVNKNAVPNDPQSPFVTS
GIRIGTPALTTRGLKEEQCCELASWICDVLDHLGDADVEAKVATQVAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcatgaccagatccagggctacgacgacgaactcttcgccgcgctggcc
gacgaggaagcccgccaggaagaccacctggagctgatcgcctcggagaactacaccagc
aagcgcgtcatgcaggctcagggcagcggcctgaccaacaagtacgccgagggctatccg
ggcaagcgctactacggcggttgcgagcacgtcgacaaagtcgagcagctggccatcgac
cgcgccaagcaactgttcggcgccgactacgccaacgtccagccgcactctggctcctcg
gccaactcggctgtctacctcgctctgctgaacgccggcgacaccatcctcggcatgagc
ctggcccacggcggccacctgacccacggcgcgaaagtgtcgtcctccggcaagctgtac
aacgccgtgcagtacggcctggacaccaagaccgggctgatcgactacgacgaagtcgag
cgcctggccgtcgagcacaagccgaagatgatcgtcgccggcttctccgcctactccaag
accctcgacttcccgcgcttccgcgccatcgccgacaaggttggcgcgctgctgttcgtc
gacatggcccacgtggccggcctggtcgccgccggcctgtacccgaacccgctgccctac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatc
ctggcgcgcagcaacgaagagatcgagaagaagctcaactccgccgtgttccccggcgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggcggtgtgcttcaaggaagcgctg
gagcccggcttcaaggactaccaggcgcaggtcatcaagaacgccaaggccatggccgcc
gtgttcatcgaccgtggctacgacgtggtttccggcggcaccgacaaccacctgatgctg
atcagcctggtcaagcagggcctgaccggtaaggaagcggacgccgccctcggccgcgtc
ggcatcaccgtgaacaagaacgccgtacccaacgatccgcagagcccgttcgtgacttct
ggcatccgcatcggcactccggcgctgaccacccgtggcttgaaggaagaacagtgctgc
gagctggcgagctggatctgcgacgtgctcgaccacctgggcgacgccgacgtcgaggcc
aaggtggccacccaggtcgccggcctgtgcgccgactacccggtttaccgctga
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