KEGG   Pseudomonas knackmussii: PKB_2340
Entry
PKB_2340          CDS       T03081                                 
Name
(GenBank) G:T/U mismatch-specific DNA glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PKB_2340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkc03400]
    PKB_2340
Enzymes [BR:pkc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     PKB_2340
DNA repair and recombination proteins [BR:pkc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PKB_2340
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: CDF83687
UniProt: A0A024HGQ6
LinkDB
Position
complement(2441477..2441998)
AA seq 173 aa
MDARLEDIVAEHLAVLFCGINPGLKAAAQGHHFAGRSNRFWRTLHRAGFTPEEMRPEQDR
TLLQYRCGLTAVVERPTASADQLSRQEFAAAAQAFEAKVRRYAPRFLAFLGKPAYCALSG
QRDVAWGLQATRFGGAAVWVLPNPSGRNLAFSLDQLVAAYRQLHLAAFASGPA
NT seq 522 nt   +upstreamnt  +downstreamnt
gtggacgcaagactggaagacatcgtcgccgagcacctggcagtgctcttctgcggcatc
aatcccgggctcaaggcggcggcccaggggcatcacttcgccggaaggagcaatcgcttc
tggcgcaccctgcaccgggccggtttcacgcccgaggaaatgcgcccggaacaggaccgg
acgctcctgcaataccgttgcgggctgacggccgtggtcgagcgaccaacggcgagcgcc
gatcagctcagccggcaggaattcgctgcggcggcgcaagctttcgaagccaaggtccga
cgctatgccccgcgcttcctggcctttctcggcaagccggcctattgcgccttgtccggc
cagcgcgatgtcgcctgggggctgcaagcgacccgcttcggcggtgcggcagtctgggtc
ctgcccaacccgagcgggcgcaacctggccttctcgctcgatcagctggtggccgcgtac
cgccagctccatctggcggcgttcgcgagcgggccggcctga

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