Pseudomonas knackmussii: PKB_2513
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Entry
PKB_2513 CDS
T03081
Name
(GenBank) two component, sigma54 specific, Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02020
Two-component system
pkc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PKB_2513
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PKB_2513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkc02022
]
PKB_2513
02035 Bacterial motility proteins [BR:
pkc02035
]
PKB_2513
Two-component system [BR:
pkc02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PKB_2513
Bacterial motility proteins [BR:
pkc02035
]
Flagellar system
Flagellar assembly proteins
Others
PKB_2513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
Mg_chelatase
AAA_16
TIP49
HTH_1
HTH_30
AAA_22
AAA_7
Response_reg
AAA_19
HTH_24
AAA_3
VpsR
ResIII
nSTAND3
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
CDF83860
UniProt:
A0A024HFQ1
LinkDB
All DBs
Position
2616326..2617714
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AA seq
462 aa
AA seq
DB search
MKQFNQLSSQAARITPAEQQVVIVGGAGEIGLDLLNEGLARLGREVLRVRHPAELDGCDL
QAVGPVFVFAERQPARTFPHIAELLQRVPQLSLVPVVEYADQEMAAQLLELGCVDYLLAP
FSESQLAALLHRHEQAQAAGEGFVSQSRAGRRLLAMAQRVAQTRAPILITGETGTGKELM
ARYIHRFSADPQAPFVAVNCAAIPEQMLESILFGHERGAFTGAVSAQPGKFEQANGGTLL
LDEIGELPLGLQAKLLRVLQEQRVERLGGQREIRLDVRIIAATNRDLQDEVAAGRFRSDL
MFRLDVLPLHISPLRERKDDILALAQRFIGQYAPQERHAELLTEPARQALLAHDWPGNVR
ELENVIQRALVLRAGLFIQPRDLGLAPPAGLVEAVPVAQLPAEGGKAALRASGKWAEYQH
VIDTIRRFGGHKTKAAESLGMTPRALRYRLNAMREQGVHLSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagttcaatcaattgtccagtcaggcggcccggatcaccccggccgagcagcag
gtggtgatcgtcggcggggccggcgagatcggcctggacctgctcaacgaggggctggcg
cgactcggtcgcgaggtgctgcgggtacgccatccggccgagctggacggctgcgacctg
caggcggtcggcccggtcttcgtcttcgccgagcgccagccggcgcgcactttcccgcac
atcgccgagctgctgcagcgggtgccgcagctgagcctggtgccggtggtcgagtacgcc
gaccaggaaatggccgcgcagctgctggagctgggctgcgtcgactacctgctggcgccg
ttcagcgaaagccagctggccgcgctgctgcaccgccacgaacaggcccaggccgcaggc
gaaggcttcgtctcgcagtcgcgcgccggccgccgtctgctggccatggcccagcgcgtg
gcgcagacccgcgcgcccatcctcatcactggcgaaaccggcaccggcaaggagctgatg
gcgcgctacatccatcgcttctccgccgatccgcaggcgcccttcgtcgcggtgaactgc
gcggcaatccccgaacaaatgctcgaatcgattcttttcggccacgaacgcggcgcgttc
accggcgctgtcagcgcccagccgggcaagttcgaacaggccaacggcggcaccctgctg
ctcgatgaaatcggcgaactgccgctgggcctgcaagccaagctgctgcgcgtgctgcag
gagcagcgcgtggagcgcctgggcgggcagcgcgagatccgcctggacgtgcgcatcatc
gccgcgaccaaccgtgacctgcaggacgaagtggccgccgggcgtttccgttccgacctg
atgttccgcctcgacgtgctgccgctgcacatcagcccgctgcgcgagcgcaaggacgac
atcctggccctggcccagcgcttcatcggccagtacgcgccgcaggagcgccacgccgag
ctgctcaccgagccggcccgccaggcgctgctggcccacgactggccgggcaacgtgcgc
gagctggaaaacgtcatccagcgcgccctggtgctgcgcgccgggctgttcatccagccc
cgcgacctgggcctcgcaccgcctgccgggctggtggaagccgtcccggtggcgcagctg
ccggccgaaggcggcaaggctgcgctgcgcgccagcggcaagtgggccgagtaccagcac
gtgatcgacaccatccgccgtttcggcgggcacaagaccaaggccgccgaaagcctcggc
atgacgccgcgcgcgctgcgctaccggctcaatgccatgcgcgagcagggcgtgcacctg
tccttctga
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