Pseudomonas knackmussii: PKB_2526
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Entry
PKB_2526 CDS
T03081
Name
(GenBank) type VI secretion protein IcmF
Organism
pkc
Pseudomonas knackmussii
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Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
CDF83873
UniProt:
A0A024HHE0
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Position
complement(2627961..2629532)
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AA seq
523 aa
AA seq
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MVYRLLREQARSLPEYRLSQHLGPQGALLTDADYAIPGLYTRTGYQGYFITQGEPLVREF
LRDNWVLGEGSSLSGQDFVRLMVELQQLYFRDYADHWSEAVNRVQLQPLLDTSQGADEVA
ALTAANSPLLQLLQEVRDNTLLPGVAEGAGEAVAALEASGKQGAVGKIAAAAAGQARDAL
AKNLPDSARLAMRRRFEPLQRLLDDNGAPSADLPPVLQALNGLQLQLAGLSHASQPQQAA
FELARNRMGGQLDALASLRTSATRLPPPLNGWFSLLAEDSWSLVLDDAHLYLNQRYQSEL
YSFYFKALNQRYPFNPQSESDVAIADFREFFKAQGVAERFFETYLRPFVSGDAEAYRLRS
VDGRSLPVSHDFLAQLGHVQAIRRSFFTDNPAEPQVQFRLEPHSIDANLHRAEFRFAGQR
LEYRHGPIVPMTFKWPAETDNDRSGLTLEELGGRRASLESDSGPWSLFRLFDQMHSEYHS
GRDVLMLKADIDGLRASYLVLAQREPNPFDLAALRRFHLPVSL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatcggctgctccgcgagcaggcgcgcagcctcccggaatatcgcctcagccag
cacctcggcccgcagggagcactgctcaccgacgccgactacgcgattcccggcctctat
acccgcaccggctaccagggctatttcatcacccagggcgaacccctggtccgcgagttc
ctgcgcgacaactgggtgctcggcgaaggcagcagcctcagcggccaggacttcgtccgc
ctgatggtcgagctgcagcagctgtacttccgcgactacgccgaccattggagcgaagcg
gtcaaccgggtgcagctgcaaccgctgctcgacaccagccagggcgccgacgaggttgcc
gccctcaccgcggccaactcgccgctgctgcagttgctgcaggaagtgcgcgacaacacg
ctgctgccaggggtggcggaaggcgccggcgaagcggtggcggccctcgaagccagtggc
aagcagggagccgtgggcaagatcgccgccgctgcggccggccaagcccgcgacgcgctc
gccaagaacctgccggacagcgcgcgcctggccatgcggcgccgcttcgagccgctgcaa
cggctgctcgacgacaacggcgcacccagcgccgacttgccgccagtgctgcaagcactc
aacggcctgcagttgcaactggcaggtttgagccacgccagccagccgcagcaagccgcc
ttcgaactggcgcgcaaccgcatgggcggccaactcgacgcactggcctcgctacgcacc
agcgccacgcgcctgccgccaccgctcaacggatggttctcgctgctggccgaggacagc
tggagcctggtgctggacgatgcccacctctacctcaaccagcgctaccagagcgagctc
tacagcttctatttcaaggccctcaaccagcgctatccgttcaacccgcagagcgaaagc
gatgtagccatcgccgacttccgcgagttcttcaaggcccagggcgtcgccgagcgcttc
ttcgaaacctacctgcggcccttcgtcagcggcgatgcggaggcttaccgcctgcgcagc
gtcgatggccgcagcctgccggtctcgcacgacttcctcgcgcaactgggccacgtccag
gcgatccgtcgcagcttcttcaccgacaacccggccgaaccccaggtgcagttcaggctg
gagccgcacagcatcgacgccaacctgcaccgtgcggaattccgcttcgccggccagcgc
ctggagtaccgccacggccccatagtgccgatgaccttcaagtggccggcggaaaccgac
aacgaccgcagcggcctgaccctggaagaactcggcggccgccgcgccagcctggaaagc
gacagcgggccctggtcgctgttccgcctcttcgaccagatgcacagcgagtaccacagc
ggtcgcgatgtgctgatgctcaaggccgacatcgacgggctgcgcgccagctacctggtg
ctggcacagcgcgagccgaacccgttcgacctcgccgccctgcgccgcttccacctgccg
gtgtcgctctga
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