Pseudomonas knackmussii: PKB_2956
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Entry
PKB_2956 CDS
T03081
Symbol
oprd7
Name
(GenBank) Porin D
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc01501
beta-Lactam resistance
pkc02020
Two-component system
Module
pkc_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PKB_2956 (oprd7)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PKB_2956 (oprd7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkc02000
]
PKB_2956 (oprd7)
01504 Antimicrobial resistance genes [BR:
pkc01504
]
PKB_2956 (oprd7)
Transporters [BR:
pkc02000
]
Other transporters
Pores ion channels [TC:
1
]
PKB_2956 (oprd7)
Antimicrobial resistance genes [BR:
pkc01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PKB_2956 (oprd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
CDF84303
UniProt:
A0A024HIM4
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All DBs
Position
3092698..3094026
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AA seq
442 aa
AA seq
DB search
MSAFRLSLLGLFIAGAPLQFALADAVGDQAQAKGFVEDSKLDLLLRNYYFNRDGKNGGGD
RKDWTQGVTAIYSSGFTQGTVGFGVEAFGNWGIRLDGGAGTSGTGNLPVRDDGSPESEYG
RAGGALKLRVSKTELRWGDLQPTAPVFAAGGTRLFPQTATGFNVLSSEIQGLDLDAGHFT
GGNGPVTTNGNHGLFASYANVEASSIDYLGGKYAVNDALSLSLYASKLEDIWRQYYTNAN
YTLPLTGDQSLNFDFNLYRTLDDGSAKAGEIDNTTWSFATAYSFLTAHTVTLAYQKVHGD
TPFDYVAFGQNGPGDTADSIFLANSVQYSDFNGPEEKSWQLRYDLNMSSYGVPGLSFMAR
YVNGHGIDGSKMSADSPYRAYGYGDDGSHHETNLEAKYVVQSGPVKDMSFRLREAIHRGN
ADQAEGDNNEFRLIVDYPISIL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcattcagactttcgctattggggttatttatcgccggtgcgccgttgcagttc
gccctggctgatgccgtcggcgaccaggcccaggccaagggtttcgtcgaggacagcaag
ctcgacctgctgctgcgcaactactacttcaaccgtgacggcaagaacggcggcggcgac
cgcaaggactggacccagggcgtcaccgccatctacagctccggtttcacccagggcacc
gtgggcttcggcgtggaagccttcggcaactggggcatccgcctggacggtggtgctggc
acctccggcaccggcaacctgccggtgcgcgacgacggctcgccggaaagcgaatacggc
cgcgccggcggcgccctcaagttgcgcgtgtcgaagaccgagctgcgctggggcgacctg
cagcccaccgcgccagtcttcgccgccggcggtactcgactgttcccgcagacagccacc
ggcttcaacgtgctgagcagcgagatccagggcctggacctggacgccgggcacttcacc
ggcggcaacggcccggtgaccaccaacggcaaccatggcctgttcgcttcctacgccaac
gtcgaggccagcagcatcgactacctgggcggcaagtacgcggtgaacgacgccctcagc
ctgtcgctgtacgcctccaagctcgaggacatctggcgccagtactacaccaacgccaac
tacaccctgccgctgaccggcgaccagtcgctgaacttcgacttcaacctctaccgcacc
ctcgacgacggcagcgccaaggccggcgagatcgacaacaccacctggtcgttcgccacc
gcctacagcttcctcacggcgcacaccgtcaccctggcctaccagaaggtccacggcgac
accccgttcgactacgtggccttcggccagaacggcccgggcgacaccgccgactcgatc
ttcctcgccaactccgtgcagtactccgacttcaacggcccggaagagaagtcctggcag
ctgcgctacgacctcaacatgagcagctacggcgtgcccggcctgagcttcatggcgcgc
tacgtcaacggccacggcatcgacggctcgaagatgtcggcggacagcccctaccgcgcc
tacggctacggcgacgacggcagccaccacgagaccaacctggaagccaagtacgtggtg
cagagcgggccggtcaaggacatgtccttccgcctgcgcgaggccatccaccgcggcaac
gccgaccaggccgaaggcgacaacaacgagttccgcctgatcgtcgactacccgatctcc
atcctctga
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