KEGG   Pseudomonas knackmussii: PKB_2975
Entry
PKB_2975          CDS       T03081                                 
Name
(GenBank) hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pkc  Pseudomonas knackmussii
Pathway
pkc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PKB_2975
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkc02044]
    PKB_2975
Secretion system [BR:pkc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PKB_2975
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1 DUF6484
Other DBs
NCBI-ProteinID: CDF84322
UniProt: A0A024HII9
LinkDB
Position
complement(3125512..3127911)
AA seq 799 aa
MLDPVRSFFDHSRHKLSVSELDVPLDVLAFEGEEGLSQPFSYRVEFTSSAGDIAADAMLG
QRASFSLYAAPDPTPKFSFNPQPVLPLRTLNGVVTAFKRLSGSRDEARYEVRLQPRLALL
DRGLQYRIYQNLSVPEIVEQVLRRHQFEGYQFHLDLSRTYPDREQVMQYAESDLAFLQRL
CADHGIWYCIRFDERIKLDVLEFHDSQRYYQRGFTMPLRPLSGMQSSGADSVWNLQASHQ
VVEASIFARSYNPREAWADLDAEVDLTRGAKSTYGEAYHYAEPYTKPGDAFAFDHEHSSD
EGSFHARLAHERYLNQQTRLAGTSSSANLIPGQVLTIEGAPQAFEKGALIVSMKCTAARD
SSFEVTFESIPDADHYSFRPPLPRKPSIAGTVPARVTSNRKNDPYGHIDKEGRYKVQFLF
DRDAWPAGQESMWLRLARPYAGDTHGLHLPLLAGTEVAVAFEQGDPDRPYIAHALHDSRH
PDHVNLYNYKRNVLRTPANNKLRMDDERGKEHVKLSTEHSGKSQLSLGHLVDSERPNPNP
RGAGFELRTDGHGAIRAGKGLFISADEQLNAQGKQLDMQPAKSLLEGAMQQMLERAEVAE
AHHNPMPDTASLERFQQAATQLEQPAMLLSAPQGIGAISPRAVLLGSGQALYLQSQGELN
LASAERLAAHSRRAISLLAQQEGIRLVSGKGPLELESHGDTLSLTALQDITVQSVEGHLQ
LTAKNGITLASGGAYIHLSPQGEIQVHSPGLLSLKGRHRWAAPGSQDFPLPELPSSVCKE
CLRRAREAAQGFLPREGSV
NT seq 2400 nt   +upstreamnt  +downstreamnt
gtgctcgatccagtccgttcgtttttcgaccattcccgccacaaactgagcgtcagcgaa
ctcgacgttcccctggatgttctcgccttcgagggcgaagaagggttgagccaacccttc
agctaccgcgtcgaattcaccagcagtgccggcgatatcgccgctgacgcgatgcttggc
caacgcgccagcttcagcctgtacgcggcacccgatccgacaccgaagttcagcttcaac
ccccagccggtgttgccgctgcgcacgctgaatggcgtggtcaccgccttcaaacgcctg
tccggctcgcgcgacgaagcccgctacgaagtgcgcctgcaaccccgtctagccctgctc
gatcgcggcctgcagtaccgcatctaccagaacctgagcgtgccggagatcgtcgagcag
gtcctgcgtcggcatcaattcgagggataccagtttcacctcgacctctcgcgcacctac
ccggaccgcgagcaggtcatgcagtatgccgagagcgatctggcctttctccagcgcctc
tgcgcggaccatggcatctggtactgcatccgcttcgacgagcggatcaagctcgacgtg
ctggagttccacgactcccaacgctactaccagcgcggtttcaccatgccgctgcgccct
ttgtcgggaatgcaaagcagcggtgccgacagcgtgtggaacctgcaggccagccaccag
gtggtggaagccagcatcttcgcccgcagctacaacccccgcgaggcctgggccgatctc
gatgccgaagtcgacctgacccgcggcgcgaaatccacctacggcgaggcctaccactac
gccgagccctacaccaaacccggggacgccttcgccttcgaccacgagcacagcagcgac
gagggctccttccacgcgcgcctggcccacgagcgctacctcaaccagcagacccgccta
gccggcaccagcagcagcgccaacctgatccccggccaagtgctgacgatcgagggcgca
ccgcaggccttcgagaagggcgcgctgatcgtgagcatgaaatgcaccgccgcccgcgac
agcagcttcgaagtcaccttcgaatccatccccgacgccgaccactacagcttccgccca
ccgctgcccaggaagccgagcatcgccggcacggtgccggcccgcgtcaccagtaatcgc
aagaacgacccgtacggccacatcgataaggaaggtcgctacaaggtccagttcctcttc
gaccgcgacgcctggcccgccgggcaagagagcatgtggctgcgcctggcccgaccctac
gccggcgacacccacggtctgcacctgccgctgctggccggcacggaggtggcggtggcc
ttcgagcaaggcgacccggatcgcccctacatcgcccacgccctgcacgacagccgccac
cccgaccacgtcaacctctacaactacaagcgcaacgtcctgcgcaccccagcgaacaac
aaactgcgcatggacgacgagcgcggaaaagagcacgtcaagctcagtaccgagcacagc
ggcaagagccagctgagcctcgggcatctggtcgatagcgagcggccgaaccccaatccg
cgcggggccggtttcgagctgcgtacggatgggcatggggcgattcgggcgggcaagggt
ctgttcatcagtgccgatgagcagttgaacgcccaaggcaagcaactcgacatgcagccg
gcgaaaagcctgctcgaaggggccatgcagcagatgcttgagcgggccgaggttgccgag
gcgcatcacaatccgatgcccgacaccgcgagcctcgaacgcttccagcaggcggccacc
cagctcgaacaacccgccatgctgctgagcgctccccagggcatcggcgcgataagccca
cgtgcggtcctgctcggcagtggccaggcgctctacctgcaaagccagggtgagctcaac
ctcgccagtgccgagcgcttggccgctcacagccggcgagccatctcgctgctcgcgcag
caggaaggcattcgcctggtctccggcaagggcccgctggagctggagtcccacggcgac
acgctatcgctcacggccttgcaggacatcaccgtgcaatcggtcgaaggccatctgcag
ctcaccgcgaagaacggcatcaccctggccagcggcggtgcctacatccacctcagcccg
caaggcgagatacaggtgcatagtcccggcctgctgagcctcaaggggcggcaccggtgg
gcggcgccaggcagccaggacttcccgctgccggagttgcccagttcggtatgcaaggag
tgcctgcgccgggcccgcgaggcggcccagggcttcctgcccagggagggttcggtatga

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