Pseudomonas knackmussii: PKB_3022
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Entry
PKB_3022 CDS
T03081
Symbol
oprd9
Name
(GenBank) Porin D
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc01501
beta-Lactam resistance
pkc02020
Two-component system
Module
pkc_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PKB_3022 (oprd9)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PKB_3022 (oprd9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pkc02000
]
PKB_3022 (oprd9)
01504 Antimicrobial resistance genes [BR:
pkc01504
]
PKB_3022 (oprd9)
Transporters [BR:
pkc02000
]
Other transporters
Pores ion channels [TC:
1
]
PKB_3022 (oprd9)
Antimicrobial resistance genes [BR:
pkc01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PKB_3022 (oprd9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
CDF84369
UniProt:
A0A024HI90
LinkDB
All DBs
Position
3177390..3178718
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AA seq
442 aa
AA seq
DB search
MKRSVEPMKLSTLALSVALGLPGLASASDQSDAKGFIEDGSLNLLSRNLFWHQTGPGAHQ
RDWSQAFMLDYSSGFTQGTVGFGIDAFGYLGLKLDGGAGRAGSPNVPFDGDGEPQKSYGK
AGGDVKMRISNSTLAYGDMKPDAPVFATADNYLVPQTATGFRLQSHEIEGLNLDAGRFTA
GTGNTTTRHDGDLLASYAGVSSSAASYAGAKYEFNKQFNASFYADRLQDIWDQGYVNLDF
TQPLADQQSLNLDFNLYRTLDSGSARAGQIDTTAYSLAAAYTLGAHTFTLAGQKVHGDEP
FDYMGFGSMDAGNAAGRYGNSIDLADSVQYSDFNGPGERSWQVRYDLDMGSLGVPGLSFM
ARHIRGYGIDGSHLNADSAYYGAYGSDDREHETDAEAKYVVQSGPAKNLSFRLREAWHAG
DASTGGHLEQTRLITEYPLNIF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttcagtggaaccaatgaagttgagcaccctggccctgtcggtggccctgggc
ctgccgggcctggccagcgccagcgaccagtccgatgccaagggtttcatcgaggacggc
agcctcaacctgctcagccgcaacctgttctggcaccagaccggccccggagcgcaccag
cgcgactggagccaggcgttcatgctcgactacagctccggcttcacccagggcacggtc
ggcttcggcatcgacgccttcggctacctgggcctgaagctcgacggcggcgccggtcgc
gccggttcgccgaacgtgccattcgacggcgacggcgagccgcagaagtcctatggcaag
gccggcggcgacgtgaagatgcgcatctccaacagcaccctggcctacggcgacatgaag
cccgacgccccggtattcgccaccgccgacaactacctggtgccgcagaccgccaccggc
ttccgcctgcagagccatgagatcgagggcctgaacctggatgccggacgcttcaccgcc
ggcaccggcaacaccaccacgcgccacgacggcgacctgctcgccagctacgccggggtc
agcagctcggcggccagctatgccggcgccaagtacgaattcaacaagcagttcaacgcg
agcttctatgccgatcggctgcaggacatctgggaccagggctacgtcaacctcgacttc
acccagccgctggccgaccagcagtcgctgaacctcgacttcaacctctaccgcaccctc
gacagcggcagcgcccgcgccggccagatcgacaccaccgcctactcgctagccgccgcc
tacaccctgggcgcgcacaccttcaccctcgccggccagaaggtgcatggcgacgagccc
ttcgactacatgggcttcggcagcatggacgccggcaacgccgcgggccgctacggcaac
tccatcgacctcgccgactcggtgcagtactccgacttcaacggtccgggcgaacgctcc
tggcaggtgcgctacgacctcgacatgggcagcctcggcgtgcccggcctgagcttcatg
gcccgccacatccgcggttacggcatcgacggcagccacctgaacgccgactctgcctac
tacggcgcctatggcagcgacgaccgcgagcacgagaccgacgccgaagccaagtacgtg
gtgcagagcggtccggcgaagaacctcagcttccgcctgcgcgaagcctggcacgccggc
gacgcctccaccggcggccacctggagcagacccgcctgatcaccgagtacccgctgaac
atcttctga
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