Pseudomonas knackmussii: PKB_3033
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Entry
PKB_3033 CDS
T03081
Symbol
ydcP
Name
(GenBank) Uncharacterized protease ydcP
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pkc01002
]
PKB_3033 (ydcP)
Peptidases and inhibitors [BR:
pkc01002
]
Peptidases of unknown catalytic type
Family U32
PKB_3033 (ydcP)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_U32
DUF3656
Motif
Other DBs
NCBI-ProteinID:
CDF84380
UniProt:
A0A024HH71
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Position
3190555..3192567
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AA seq
670 aa
AA seq
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MKKNMSLPKNHLELLSPARDVSIAREAILHGADAVYIGGPSFGARHNACNEVSDIAQLVE
FAHRFHARVFVTINTILHDDELEPARKLIHQLYDAGVDALIVQDLGVLDLDIPPIELHAS
TQTDIRTLARAKFLDQAGFSQLVLARELNLKEIRAIADETDAAIEFFIHGALCVAFSGQC
NISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVAFEKHLLSMKDNNQSANLSALVDAGV
RSFKIEGRYKDMGYVKNITAYYRQRLDGILAERPDLARASSGRTEHFFLPDPDKTFHRGS
TDYFVTERKVDIGAFDTPTFTGLPVGVVEKVGKRDLIVATHEPLTNGDGLNVLVKREVVG
FRANIAEPKGEFEEDGEKRYRYRVEPNEMPEGMYRLRPNHPLSRNLDHNWQQALQKTSAE
RRVGLSWVAKLREERLELTATSEEGVSISVALDGPFGAANKPEQALEQLHDLLGQLGTTQ
YHADRIELDAPQAFFIPNSQLKSLRREAIEALTEARVKAHPRGGRKAESNPPPVYPESHL
SFLANVYNHKAREFYHRHGVQLIDAAYEAHEEPGEVPVMITKHCLRFSFNLCPKQAKGVT
GVRTKVAPMQLIHGDEVLTLKFDCKPCEMHVIGKMKGHILDLPQPGSAVDQIVGQITPED
LLKTIRRAPH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacatgtccctgcccaagaaccacctcgaactgctcagccccgcccgcgat
gtgagcatcgcccgcgaagccatcctgcatggcgccgacgccgtgtacatcggcggcccg
agcttcggcgcgcgtcacaacgcctgcaacgaggtgagcgacatcgcccaactggtggaa
ttcgcccatcgcttccacgcgcgggtgttcgtcaccatcaacaccatccttcacgacgac
gagctggagccggcgcgcaagctgatccaccagctctacgatgccggcgtcgacgcgctg
atcgtgcaggacctgggcgtgctcgacctggacatcccgccgatcgagctgcacgccagc
acccagaccgacatccgcaccctggcgcgggccaagttcctcgaccaggccggcttctcc
cagctggtgctggcccgcgaactgaacctgaaggaaatccgcgcgatcgccgacgaaacc
gacgcggccatcgaattcttcatccacggcgcgctgtgcgtggccttctccggccagtgc
aacatctcccacgcgcagaccggccgcagcgccaaccgcggcgactgctcgcaggcctgc
cgcctgccgtacaccctgaaggacgaccagggccgcgtggtggccttcgagaaacacctg
ctgtcgatgaaggacaacaaccagagcgccaacctcagcgccctggtcgacgccggcgtg
cgttccttcaagatcgaagggcgctacaaggacatgggctacgtgaagaacatcaccgcc
tattaccgccagcgcctggacggcatcctcgccgagcgcccggacctcgcccgcgcctcc
agcggtcgcaccgagcacttcttcctgcccgacccggacaagaccttccaccgcggcagt
accgactacttcgtcaccgagcgcaaggtcgacatcggcgccttcgacaccccgaccttc
accggcctgccggtgggcgtggtggagaaagtcggcaagcgcgacctgatcgtcgccacc
cacgaacccctgaccaacggcgacggcctcaacgtgctggtcaagcgcgaggtggtcggc
ttccgcgccaacatcgccgagccaaaaggcgagttcgaggaagacggcgagaagcgctat
cgctaccgcgtcgagcccaacgagatgcccgagggcatgtaccgcctgcggccgaaccac
ccgctgtcgcgcaacctcgaccacaactggcagcaggcgctgcagaagacctccgccgag
cgccgcgtcggcctgtcgtgggtcgccaagctgcgcgaggaacgcctggagctgaccgcc
accagcgaagaaggcgtgagcatcagcgtcgccctggacggccccttcggcgccgccaac
aagccggaacaggcgctggaacaactgcacgacctgctcggccagctgggcaccacccag
taccatgccgatcgcatcgagctggatgcaccgcaagccttcttcatccccaattcgcag
ctcaagtcgctgcgccgcgaagccatcgaggcgctcaccgaagcccgcgtgaaggcgcac
ccgcgcggcggccgcaaggccgagagcaacccgccgccggtatacccggagtcgcacctg
tcgttcctcgccaacgtgtacaaccacaaggcccgcgagttctaccaccgccacggcgtg
cagctgatcgacgcggcctacgaggcccacgaggaacccggcgaagtgccggtgatgatc
accaagcactgcctgcgcttctccttcaacctctgcccgaaacaggccaagggcgtcacc
ggcgtgcgcaccaaggtcgcgccgatgcagctgatccacggcgacgaagtgctgaccctg
aagttcgactgcaagccgtgcgagatgcacgtgatcggcaagatgaagggccacatcctc
gacctgccgcagccgggcagtgcggtcgaccagatcgtcggccagatcacccccgaagac
ctgctcaagaccatccgccgcgcgccgcactga
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