Pseudomonas knackmussii: PKB_3191
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Entry
PKB_3191 CDS
T03081
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc00270
Cysteine and methionine metabolism
pkc01100
Metabolic pathways
Module
pkc_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PKB_3191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkc03000
]
PKB_3191
03032 DNA replication proteins [BR:
pkc03032
]
PKB_3191
03036 Chromosome and associated proteins [BR:
pkc03036
]
PKB_3191
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pkc02048
]
PKB_3191
Enzymes [BR:
pkc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
PKB_3191
Transcription factors [BR:
pkc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PKB_3191
DNA replication proteins [BR:
pkc03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
PKB_3191
Chromosome and associated proteins [BR:
pkc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
PKB_3191
Prokaryotic defense system [BR:
pkc02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
PKB_3191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
CDF84536
UniProt:
A0A024HIM2
LinkDB
All DBs
Position
3378151..3379752
Genome browser
AA seq
533 aa
AA seq
DB search
MNPHPCPPTHGRPRNAPLLYGSVCSGIEAVSLAWQPLGLEAAWFAEIEPFPSAVLAHRYP
HVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVAGARQGLNDPRGALTLAYVELAN
AIDQTRHQDRRPSATLVWENVPGVLNDRSNAFGHFLGALAGEGCALQPPGEKWAHAGCVS
GPRRRIAWRVLDAQYFGVAQRRKRVFLVASGGDGLDPVEVLFERTGLLGDSSAGSAPWQE
AARAAGSGAEAAGGYAGLKQPYGTVTMTFGFSGGTGPVDVAACLMAAGPKHDIRTETFMV
QSIAGSIAHTLDTANGGKGSSEDGTGKGVPIIAFTAQGSGADATMDRAPTLRAGGHRNSH
ANAGVVPAIAFAQNNRGEVRFESGHGQVACTVLSNGKPGYGVPMVACVALRGRQQGLTAE
LGGGVSDALRTSGGGADKPHVLAPDFEAHFRYDWSEPGPGDWSHWRVRRLMPVECERLQG
MPDDYTLIPYRGKPAADAPRYKAIGNSMAVPCVAWLGQRLVQCLHKTGSTAPD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccatccttgccccccaacacacggcaggccgcgcaacgcgccgctgctctac
ggcagcgtgtgcagcggcatcgaggccgtgagcctcgcctggcaacccctcggcctcgaa
gctgcgtggttcgctgagatcgagccgttcccgagcgccgtgctcgcccatcgttacccc
cacgtgcccaacctgggcgacatgactgcgatcgcccgccaggtgcgcgccggcaccgtg
ccggcgcccgacatcctggtcggcggcacaccgtgccagtcgttcagcgtagccggcgcg
cgccagggactgaatgacccgcgcggcgccttgacccttgcctatgtggagcttgcaaat
gccatcgaccaaacccgccaccaagaccgccgcccgtcggcaaccctcgtctgggaaaac
gtccccggcgtcctcaacgaccgcagcaatgccttcgggcatttcctgggcgcactggcc
ggagaaggctgtgcgctccaaccgccaggggaaaaatgggcgcacgcaggttgtgtgtct
ggaccccggcgccgcatcgcctggcgcgtgctcgacgctcaatatttcggtgtcgcccaa
cgccgcaagcgtgtgtttcttgtggcaagtggtggagatggcctcgatcccgtcgaagta
ctttttgagcgcacaggcctgctcggggattcttctgcgggcagcgcgccgtggcaagaa
gctgcccgtgctgctggatcgggtgctgaagcagcaggcggatacgcaggactgaagcag
ccctacggcacggtcacgatgaccttcggattcagtggcggcaccggccccgtcgatgtg
gcggcatgtctcatggccgcaggccccaagcacgacatccgcacggagacgttcatggtg
cagtcgatcgccggcagcatcgcccacaccctcgacactgccaacggcggcaagggcagc
agcgaagacggtacgggcaagggtgtgccgatcatcgctttcaccgcgcagggcagcggc
gcggatgccacgatggatcgggctccgacgctgcgtgcaggtgggcaccgcaacagccat
gcgaacgccggtgtcgtgcccgccatcgccttcgcgcagaacaaccgcggcgaagtgcgt
ttcgagtcgggccatgggcaggtagcttgcaccgtcctttccaacggcaagccgggctat
ggcgtgccgatggtggcctgcgttgccctgcggggacggcagcagggtcttaccgcggaa
ctgggcggcggcgtatcggacgcactgcgcaccagcggcggcggcgctgacaagccccat
gtgctggcacccgacttcgaggcgcatttccgttacgactggagcgagcccggccccggc
gactggtcgcactggcgggtgcggcggctaatgcccgtggaatgcgagcggctgcaaggc
atgcccgacgactacacgctgatcccgtaccgcggcaagcccgccgcggatgctccgcgc
tacaaggcaatcggcaattccatggcggtgccgtgcgttgcgtggcttggccagcggctg
gtgcagtgcctgcacaagacgggatcgacagctccggattga
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