Pseudomonas knackmussii: PKB_3308
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Entry
PKB_3308 CDS
T03081
Name
(GenBank) LysR family transcriptional regulator
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkc03000
]
PKB_3308
Transcription factors [BR:
pkc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PKB_3308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
CDF84652
UniProt:
A0A024HJH0
LinkDB
All DBs
Position
complement(3491847..3492770)
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AA seq
307 aa
AA seq
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MRTPIMKLHQLRAIVAICESGSIQEASRLLHISQPALSKSIKELEAELGVPLLVRSNRGI
TATEYGDRLVRRARLVVEEVRRARDEIEALKGAMDGRVAIGVSPVTPSQQFAACLLRYRK
RYPKVQLQINELRPAKLLEGLREGQLDLVLTSQPASRNIDGFQWQELYAQPTTLAVRKGH
PLRAVRSLRELLDQEWLIPDSLEVSLAGEMFREQGVEPPQRIVECASVVLYAELAAHTDA
VSFWSRRVFDLPIVSSTLDALNIAERVPGTDISLVSRPAELMTREAQMLVDDLVYAFKGP
HLQKPGA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactccgatcatgaagctgcatcaactccgcgccatcgtcgccatctgcgaaagc
ggcagcatccaggaagcctcgcgcctgctgcacatctcccagccggccctgtccaagagc
atcaaggaactcgaggccgagctcggcgtgccgctgctggtgcgctccaatcgcggcatc
accgccaccgaatacggtgaccgcctggtgcgccgcgcgcgcctggtggtggaggaggtg
cgccgtgcgcgcgacgagatcgaggcgctcaagggcgcgatggacggccgcgtggccatc
ggcgtttcgccggtgacgcccagccagcagttcgccgcctgcttgctgcgctatcgcaag
cgctacccgaaggtgcagctgcagatcaacgaactgcgcccggccaagctgctggaaggc
ctgcgcgaaggtcagctggacctggtgctgacctcgcaaccggcctcgcgcaacatcgac
ggtttccagtggcaggagctgtacgcccagccgaccaccctggcggtgcgcaagggccat
ccgctgcgcgcggtgcgttcgctgcgcgagctgctcgatcaggagtggctgatccccgat
tcccttgaagtctccctggccggcgagatgttccgcgaacagggcgtggagccgccgcaa
cgcatcgtcgaatgtgcctcagtggtgctctacgcggagctcgcggcccataccgatgcg
gtgagcttctggtcgcggcgggtgttcgacctgccgatcgtctccagcaccctggatgcg
ctgaacatcgccgagcgcgtgccgggtaccgacatttccctggtctcgcggccggcggaa
ctgatgacccgcgaggcgcagatgctggtcgacgacctggtctacgccttcaaggggccc
cacctgcagaagcccggcgcctga
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