Pseudomonas knackmussii: PKB_3793
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Entry
PKB_3793 CDS
T03081
Name
(GenBank) hypothetical protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkc01011
]
PKB_3793
Enzymes [BR:
pkc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PKB_3793
Peptidoglycan biosynthesis and degradation proteins [BR:
pkc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PKB_3793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
CDF85131
UniProt:
A0A024HJW2
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All DBs
Position
3972082..3974010
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AA seq
642 aa
AA seq
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MRGRLSLVFSCLFLALTSVSSVQAASLTQQRQMYDEAKAALARNDNGPYLRYRQALADYP
LEPYLGYDDLTNRLKSASDTEIEAFLTEHGDLPQINWMKLRWLRQLADSGDWKTFLDYYD
PKMNFTELDCLYGQYQLTHGQKAAGNETTRKLWLVGKSQPDACDALFSVWEADGQLTEDM
IWKRLKLAAEKGNYGLASTLSKRLAGLGSLGELMIKVAQSPAQLSQTARFDQRTHAMADV
VGLGLRRLGKQDPERALDLLDHYENSLPFSTEEKVNIARQIGLGLARSYDPRALPLMTKY
DPELRDNTVSEWRLRLLMRLGRWEDAYQLTRQLPKDLAETNRWRYWQGGTLQLAQPQNPA
AMSLYQPLARERDFYGFLAADRINAPYQLNNRPAPISPQVMQRVRNAASTRRALEFYARG
DIISARREWYYAARVFNRDELLAQAKMAYDMQWYFPAIRAISQAQYWDDLDIRFPIAHRD
SLLREARNRGLHSSWVFAITRQESAFMSDARSGVGATGLMQLMPATAKETARKFGIPFGS
PQQLIVPEVNIQLGAAYLSQVEGQFNGNRVLATAAYNAGPGRVRQWLKNARHLSFDVWVE
SIPFDETRQYVQNVLSYAVIYGQKLNAPQPLVDWHERFFDEL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctttccctagttttttcctgcctgttccttgccttgaccagcgtcagc
tcggtacaggccgcgtcgctgactcaacagcggcagatgtacgacgaagccaaggccgcc
ctcgcgcgcaacgataacggcccctacctgcgctaccgccaggccctggccgattatccg
ctggagccgtacctgggctacgacgacctgaccaaccgtctgaaaagcgccagcgacacc
gagatcgaagccttcctcaccgagcatggcgaccttccgcagatcaactggatgaagctg
cgctggctgcgccagctggccgatagcggcgactggaagaccttcctcgactactacgac
ccgaagatgaacttcaccgagctggactgcctctacggccagtaccagctcacccatggc
cagaaagccgccggcaacgagaccacgcgcaagctgtggctggtcggcaagtcccagccg
gacgcctgcgacgcgctgttcagcgtctgggaagccgacggccagctcaccgaagacatg
atctggaagcgcctgaagctcgccgccgagaaaggcaactacggcctggccagtaccttg
tcgaagcgcctggcgggcctgggcagcctcggcgagttgatgatcaaggtcgcgcagagc
ccggcgcagcttagccagaccgcccgcttcgaccagcgcacccacgccatggccgatgtc
gtcggcctcggtctgcgccgcctgggcaagcaggaccccgagcgcgcgctcgacctgctc
gaccattacgagaacagcctacccttctccaccgaggagaaggtcaacatcgcccggcag
atcggcctgggcctggcgcgcagctacgatccccgcgccctgccgctgatgaccaagtac
gacccggagctgcgcgacaacaccgtcagcgaatggcgcctgcgcctgctgatgcgcctg
ggccgctgggaagacgcctaccagctgacccgccaattgcccaaggacctcgccgagacc
aaccgctggcgctactggcagggggggaccctgcagctggcgcagccgcagaacccggca
gcgatgagcctctaccagccgctggcacgcgagcgtgatttctacggtttcctcgccgcc
gaccggatcaacgccccttatcagttgaacaaccgcccggcgccgatcagcccgcaggtg
atgcagcgtgtgcgcaatgccgccagcacccggcgcgccctggagttctacgcccgtggc
gacatcatcagcgcccgccgcgagtggtactacgcagcccgcgtattcaaccgcgacgaa
ctgctggcgcaggcgaagatggcctacgacatgcagtggtacttcccggcgattcgcgcc
atcagccaggcgcagtactgggacgacctcgacatccgcttccccattgcgcaccgcgac
agcctgctgcgcgaggcgcgcaaccgtggattgcactccagctgggtgttcgccatcacc
cgccaggagagtgcgttcatgtccgatgcccgctccggcgtcggcgccaccggcctgatg
cagctgatgccggccaccgccaaggaaaccgcgcgcaagttcggcattcccttcggctcg
ccgcagcagctgatcgtccccgaggtcaacatccagctcggcgccgcgtatctcagccag
gtcgagggacagttcaacggcaaccgcgtactagcgaccgccgcctacaacgcaggcccc
ggccgcgtgcgccagtggctgaagaatgcacgccacctgtcgttcgacgtctgggtggag
agcattcccttcgacgaaacccgccagtacgtgcagaacgtgctgtcctatgcggtgatc
tacgggcaaaaactcaacgccccgcagccactggttgactggcacgagcgcttcttcgac
gagctctga
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