Pseudomonas knackmussii: PKB_3867
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Entry
PKB_3867 CDS
T03081
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkc03016
]
PKB_3867 (truA)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PKB_3867 (truA)
Transfer RNA biogenesis [BR:
pkc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PKB_3867 (truA)
Prokaryotic type
PKB_3867 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CDF85201
UniProt:
A0A024HK14
LinkDB
All DBs
Position
complement(4058352..4059215)
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AA seq
287 aa
AA seq
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MVVLNEFESAVGEVAAADVSRIALGIEYKGARYRGWQRQESGVPSVQASLEKALSEVAAE
PVSVMCAGRTDASVHGSGQVVHFDTRVERPLKAWVMGGNANLPADISVTWAKVMPAHFHA
RFSAMARRYRYVIYNDPIRPAHMAEEVTWNHRPLDIERMREAATALVGTHDFTSFRAVQC
QAKSPVKTVHHLQVLEHGRFIVLDVRANAFLHHMVRNFAGVLMTVGAGERSPEWVSEVLE
ARDRRAGGVTAHPFGLYLVRVEYPEEFDLPERYLGPHFLSSLPDTLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcttgaacgaattcgagagcgcggtgggcgaagtagctgccgcggatgtcagc
agaatcgccctgggcatcgagtacaaaggcgcgcgctaccgtggctggcagcgccaggag
agcggcgtgccttcggtccaggcttctctggagaaggcgctgtccgaggtggcggccgag
cccgtcagcgtgatgtgcgcaggacgtaccgatgcttcggtgcatggcagtggtcaggtc
gtgcatttcgacacacgtgtagagcggcccctgaaggcctgggtgatgggcggcaacgcc
aacctgccggccgatatcagcgtcacctgggcgaaggtcatgccggcgcatttccacgcg
cgcttctctgccatggcccggcgttatcgctacgtcatctacaacgacccgatccgcccg
gcgcacatggccgaggaagtcacctggaatcaccgcccgctggatatcgagcgcatgcgc
gaggctgcaacggcgctggtcggcacccacgacttcacctccttccgcgcggtgcagtgc
caggccaagtcaccggtgaagactgtccatcacctgcaggtcctcgagcacggtcgcttc
atcgtgctggatgttcgcgccaacgccttcctgcatcacatggtgcgcaatttcgccggc
gtgctgatgacggtcggggcgggtgagcgctcgccggaatgggtgagcgaggtgttggaa
gcgcgcgatcggcgcgccggcggcgtcaccgcgcacccgttcgggctctatctggtgcgc
gtggaataccccgaggaattcgatttgccggagcgttacctggggccgcatttcctttca
tctttgcccgataccctcggctga
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