Pseudomonas knackmussii: PKB_3891
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Entry
PKB_3891 CDS
T03081
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PKB_3891 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_3891 (uvrB)
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PKB_3891 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PKB_3891 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
TcpS
AAA_22
DUF848
Motif
Other DBs
NCBI-ProteinID:
CDF85221
UniProt:
A0A024HK29
LinkDB
All DBs
Position
complement(4081033..4083048)
Genome browser
AA seq
671 aa
AA seq
DB search
MSSFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTM
VLAPNKTLAAQLYGEFKTFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQ
MRLSATKALLEREDAIIVCTVSSIYGLGDPASYLKMVLHLDRGDRMDQRELLRRLTSLQY
TRNDMDFARASFRVRGDVIDVFPAESDLEAIRVELFDDEVENISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMEAVEQIKEELKVRLDYLRNNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRGPGEPPPTLYDYLPANSLLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPLRFEEWEAISPQTIFVSATPGPYEEQHAGRVIEQVVRPTGLVDPQ
IEVRPASTQVDDLLSEIRLRVAQEERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERMEIIRDLRTGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADNITGSMQRAMGETERRRNKQIAFNEKHGIVPKGVKKDIKDILEGATV
PGAKGKRRGVAKVAEESGRYEGELRSPSEITKRIRQLEEKMYQLARDLEFESAAAVRDEI
HKLRERLVEVG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcattccagctggattcgcgcttcaagcccgccggtgatcagccggaagccatc
cgacagatggtggaagggctggaagcggggctgtcgcaccagaccctgctgggggtgact
ggctccggcaagaccttcagcatcgccaacgtcattgcccaggtgcagcggccgaccatg
gtcctggcgccgaacaagacgctggctgcgcagctctacggcgaattcaagaccttcttc
ccgaacaatgcggtcgagtacttcgtttcttactacgactattaccagccagaagcctac
gtaccgtcctccgatacctatatcgagaaggattcgtcgatcaatgaccacatcgagcag
atgcgtctgtcggcgaccaaggcattgctggagcgcgaggacgcgatcatcgtttgcacc
gtgtcgtccatttacggtctgggcgacccggcgtcctacctgaagatggtcctgcacctg
gatcgcggcgatcggatggaccagcgtgagctgctgcgccgcctgaccagcctgcagtac
acccgcaacgacatggacttcgcccgcgccagtttccgcgtgcgcggcgacgtgatcgac
gtcttcccggcggaatccgacctggaggccatccgcgtcgagctgttcgacgacgaggtg
gagaacatctccgccttcgatccgctgaccggcgaagtgatccgcaagttgccgcgcttc
accttctatcccaagagccactacgtgaccccgcgcgaaacgctgatggaggcggtggag
cagatcaaggaagagctcaaggtgcgcctggactacctgcgcaacaacaacaagctggtc
gaagcgcagcgcctggagcagcgcacccgcttcgacctggagatgattctcgagctgggc
tactgcaacggcatcgagaactactcgcgctatctctccgggcgcggtcccggcgagccg
ccgccgaccctctacgattacctgccggccaactcgctgctggtgatcgacgaatcccac
gtcagcgttccgcaggtcggcgccatgtacaaaggcgaccgctcacgcaaggaaaccctg
gtcgagtacggtttccgcctgccctcggcgctggacaaccggccgctgcgtttcgaggag
tgggaggcgatcagcccgcagaccatcttcgtctcggcgacacccggcccttatgaagag
cagcatgccgggcgggtgatcgagcaggtggtgcgtccgactggtctggtcgacccgcag
atcgaggtgcgccccgcgtccactcaggtcgacgacctgctttcggagatccgcctgcgc
gtggcccaggaggagcgcgtgctggtcaccaccctgaccaagcgcatggccgaggacctc
accgattacctgggcgaccacgacgtgcgcgtgcgttacctgcactcggacatcgacacc
gtcgagcgcatggagatcatccgcgacctgcgcaccggcgccttcgacgtgctggtcggc
atcaacctgctgcgcgaggggctggacatgcccgaggtgtcgctggtggcgatcctcgac
gcggacaaggaagggttcctgcgttcggagcgctcgctgatccagaccatcggccgcgcg
gcgcgcaacctcaatggcaaggcgatcctctacgccgacaacatcacgggttcgatgcaa
cgcgccatgggtgaaaccgagcggcgccgcaacaagcagatcgccttcaacgagaagcac
ggcatcgtgcccaagggcgtgaagaaggacatcaaggacatcctcgaaggcgccacagtc
ccaggtgccaagggcaagcgtcgcggcgtggccaaggtggcggaggagagtggtcgctac
gagggcgaactgcgctcgccgagcgagatcaccaagcgcatccgccagttggaggagaag
atgtaccagttggctcgcgatctggagttcgaatccgccgcggcggtgcgcgacgaaatc
cacaagctgcgcgagcgcctggtggaggtcggctga
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integrated database retrieval system
