Pseudomonas knackmussii: PKB_3907
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Entry
PKB_3907 CDS
T03081
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkc03032
]
PKB_3907 (gyrA)
03400 DNA repair and recombination proteins [BR:
pkc03400
]
PKB_3907 (gyrA)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PKB_3907 (gyrA)
DNA replication proteins [BR:
pkc03032
]
Prokaryotic type
DNA Topoisomerases
PKB_3907 (gyrA)
DNA repair and recombination proteins [BR:
pkc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PKB_3907 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CDF85236
UniProt:
A0A024HK44
LinkDB
All DBs
Position
complement(4099581..4102355)
Genome browser
AA seq
924 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLSEVVDGCLALMDNPELSVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YIRARAEIEDMEKGGNRQQIIITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKASPTPAEAKERLVSTAWESSA
VEAMVERAGADACRPEDLDPQYGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLSEYQ
EILTLIGELIRILTNPQRLMEVIREELEKVKAEFGDARRTEIVASQVDLTIADLITEEER
VVTISHGGYAKSQPLAAYEAQRRGGKGKSASGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWLRTFEIPEASRAARGRPLVNLLPLDEGERITAMLQIDLEAVRAQFAGDEGDDDDVVAE
QVAEVVEAEEAEEGDDADFSQDEPTGAYIFMATMKGTVKKTPLIQFTKPRSNGLIALKLE
EGDSLIAAAITDGSKDVMMFSDAGKVIRFKESKVRIMGRNARGVRGMRLAEGQRIISMLI
PECREAQILSASARGYGKRTPLADYPRRGRGGQGVIAMVINERNGNLVGAVQVLDGEEIM
LISDQGTLVRTRVDEVRGAGRNTQGVILIKLAADETLVGLERVQEPTVVEDDVIDGEIVE
GEVADENQEAGEVAAEEAPQASED
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaacatcgaagacgaactccgacagtcc
tacctcgattacgcgatgagcgtgatcgtcggtcgtgccctgcccgatgcgcgcgacggc
ctgaaaccggtgcaccgccgcgtcctgtacgccatgagcgaactgggcaacgactggaac
aagccctacaagaaatccgcccgtgtggtcggtgacgtgatcggtaagtaccacccgcac
ggtgataccgcggtctacgacaccatcgtgcgtatggcccagcccttctcgctgcgctac
atgctggtcgacggccagggcaacttcggttcggtcgacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatggcgaagctggcccacgagcttctcgccgacctcgacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcggtcatgccg
accaagatccccaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacatcccgccgcacaacctgagcgaagtggtcgacggttgcctggcgctgatggacaac
cccgaactgtccgtcgatgacctgatgcagtacatccccggtcccgacttcccgaccgcg
ggcatcatcaacggccgtgccggcatcatcgaggcctaccgcaccggtcgtggccgcatc
tatatccgtgcccgcgccgaaatcgaggacatggagaagggcggcaaccgccagcagatc
atcatcaccgagctgccctaccagctgaacaaggctcgcctgatcgagaagatcgccgag
ctggtgaaagagaagaagatcgaaggcatcaccgaactgcgcgacgagtccgacaaggac
ggcatgcgcgtggtcatcgagctgcgccgcggcgaagtcggcgaggtcgtgctgaacaac
ctctacgcccagacccagctgcagagcgtcttcggcatcaacgtggtagccctggtcgac
ggccagccgcgcacgctgaacctgaaggacatgctcgaagtcttcatccgccaccgccgc
gaagtggtgacccggcggaccgtctacgagctgcgcaaggctcgcgagcgcggccacatc
ctcgaaggccaggcggtcgccttgtcgaacatcgacccggtgatcgagctgatcaaggcc
tcgccgaccccggccgaagccaaggagcgcctggtctccaccgcctgggaatccagtgcc
gtggaagccatggtcgagcgcgccggcgccgatgcctgccgtcctgaagacctggacccg
caatacggcctgcgcgatggcaagtactacctgtcgccggaacaggcccaggccatcctg
gaactgcgcctgcaccgcctgaccggcctggaacacgagaagctcctgtccgaataccag
gaaatccttaccctgatcggcgagctgatccgcatcctgaccaacccgcagcgcctgatg
gaagtcatccgcgaggagctggagaaggtcaaggccgagttcggcgacgcccgccgcacc
gagatcgtcgcgtcgcaggtcgacctgaccatcgccgacctgatcaccgaggaagagcgt
gtcgtcaccatctcccacggcggctacgccaagtcgcaaccgctggcggcctacgaggcc
cagcgccgcggcggcaagggcaagtcggcgagcggcgtgaaggacgaggactacatcgag
cacctgctggtcgccaacagccacgccaccctgctgttgttctccagcaagggcaaggtc
tactggctgcgtaccttcgagattccggaagcctcgcgcgctgcgcgtggccgtccgctg
gtgaacctgctgccgctggacgaaggcgagcgcatcaccgccatgctgcagatcgacctg
gaagccgtgcgggcgcagttcgccggtgacgagggcgatgacgacgacgtggttgccgag
caggtcgccgaggtggtggaagctgaagaggccgaagaaggcgacgacgccgacttcagc
caggacgagccgaccggcgcctacatcttcatggccaccatgaaaggcaccgtgaagaag
accccgctgatccagttcaccaagccgcgctccaacggcctgatcgcgctgaagctggaa
gagggcgattcgctgatcgccgccgccatcaccgacggttcgaaggacgtgatgatgttc
tcagacgccggcaaggtgatccgcttcaaggaaagcaaggtgcgcatcatgggccgtaac
gcccgtggcgtgcgcggcatgcgcctggcggaaggccagcgcatcatctccatgctgatc
cccgagtgccgcgaagcgcagatcctctcggcttccgcacgcggttacggcaagcgcacc
ccgctggccgactacccgcgccgcggtcgtggtggccagggcgtgatcgccatggtgatc
aacgagcgcaacggcaacctggtgggcgccgttcaggtgctggatggcgaggagatcatg
ctgatttccgaccagggcaccctggtccgtacccgcgtcgacgaagtccgtggcgcaggc
cgtaacacccagggcgtgatcctcatcaagctggccgccgacgaaacgctggtgggcctg
gagcgggtgcaggaaccgaccgtcgtcgaagacgacgtcattgacggcgagatcgtcgag
ggcgaagtggcggacgagaaccaagaagcaggcgaagtcgcggctgaagaagccccgcag
gccagcgaagactga
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