Pseudomonas knackmussii: PKB_3914
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Entry
PKB_3914 CDS
T03081
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pkc
Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkc03009
]
PKB_3914 (rluB)
Enzymes [BR:
pkc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PKB_3914 (rluB)
Ribosome biogenesis [BR:
pkc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PKB_3914 (rluB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CDF85243
UniProt:
A0A024HLD7
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All DBs
Position
complement(4108686..4110077)
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AA seq
463 aa
AA seq
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MNDTHENPELTPAPAGEKLQKVLARMGVGSRRDVEAWIEEGRVKVNGAVASLGQRVGDHD
AIAVDDRLLKREKLEEHVRRVLIYNKPEGEVCTRDDPEGRPTVFDRLPRLRSGRWINIGR
LDINTTGLLLFTTDGELANRLMHPSYEMDREYAVRVRGEVDEEMIERLKSGVMLEDGPAK
FSDIQQAPGGEGFNHWYHVVVMEGRNREVRRLWESQGVVVSRLKRVRFGPVFLTSELTMG
RYREMEQREVDILSEEVGLTPVALPEITVKQREKLDRQQRKLSKPLSRSERPDAGRGSRN
RKEAAEGERPRRAPRGDAGESRTPRRDAGEGRPVRAPRGEGEGRAPRQDSGRPARGPRGE
GEGRAPRAPRPDSAGGRPARAPRGEGEGRAPRQDGGRPARGPRQDDRSKGAPLAERPSDV
NRKRPAKPSGEHAERPSKPVVRKPLNKRRPQPSGDGMRPGFKR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacacgcacgaaaacccagaactgaccccagcccctgctggcgaaaagctgcag
aaagtcctcgcacgcatgggcgtcggctcgcgccgcgacgtcgaagcctggatcgaggaa
ggccgggtcaaggtcaacggcgccgtagccagcctcggccagcgcgtcggcgaccatgac
gccatcgccgtcgacgatcgcctgctcaagcgcgagaagctcgaagagcacgtccgtcgc
gtcctgatctacaacaagcccgaaggcgaagtctgcacccgcgacgatccggaaggccgt
ccgaccgtgttcgaccgcctgccgcgcctgcgcagtggccgctggatcaacatcggccgc
ctggacatcaacaccaccggcctgctgctgttcaccaccgacggtgagctggcgaaccgc
ctgatgcacccgtcctacgagatggaccgcgaatacgccgtgcgcgtacgtggcgaagtc
gacgaagagatgatcgaacgcctgaagagcggcgtgatgctggaagacggcccggccaag
ttcagcgacatccagcaggcgcccggcggcgaaggcttcaaccactggtaccacgtggtg
gtgatggaaggccgtaaccgcgaagtgcgtcgcctgtgggaatcccagggcgtggtggtc
agccgcctgaagcgcgtgcgcttcggcccggtgttcctcacctccgagctgaccatgggt
cgctaccgcgagatggagcagcgcgaggtggacatccttagcgaagaggtcggcctcacg
ccggtcgccctgccggaaatcaccgtcaagcagcgcgagaagctcgatcgccagcagcgc
aagctttccaagccgctgtcgcggagcgagcgtccggatgccggtcgcggctcccgcaac
cgcaaggaagccgccgaaggcgagcgtccgcgtcgtgcgccgcgcggcgatgctggtgaa
agccgcactccgcgtcgcgacgcaggcgaaggtcgtccggtccgcgcgccgcgtggcgaa
ggcgaaggccgtgcgccgcgtcaggacagtggccgtccggcccgtggtccgcgcggcgag
ggcgaaggtcgcgccccgcgcgcgccgcgtccggattccgccggtggtcgtccggcccgc
gctccgcgtggcgagggcgaaggccgtgcgccgcgtcaggacggtggtcgtccggctcgt
ggtccgcgtcaggacgatcgcagcaagggtgccccgctggccgagcgtccgagcgacgtg
aaccgcaagcgtccggccaagccgagcggcgagcacgccgagcgtccgtccaagccggtc
gtgcgcaagccgctgaacaagcgtcgtccgcagccgtctggcgatggcatgcgcccgggc
ttcaagcgctaa
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