KEGG   Pseudomonas knackmussii: PKB_3926
Entry
PKB_3926          CDS       T03081                                 
Name
(GenBank) PHP domain-containing protein
  KO
K02347  DNA polymerase (family X)
Organism
pkc  Pseudomonas knackmussii
Brite
KEGG Orthology (KO) [BR:pkc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkc03400]
    PKB_3926
DNA repair and recombination proteins [BR:pkc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    PKB_3926
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 HHH_5 PHP DNA_pol_B_palm Cdd1 RNase_P_p30
Other DBs
NCBI-ProteinID: CDF85255
UniProt: A0A024HJN7
LinkDB
Position
complement(4121958..4123715)
AA seq 585 aa
MPGSPRASAGLPAVDNERIARVFEEIADLLELEVANPFRIRAYRNAARSVRGAESSLAAL
VLAGEPLPKLPGIGEDLAEKIQVISRTGTCPLLERLHGEVPAGQTELLHLPSIGPKRVRL
LHQELGIDSLQDLQAALGNGRLARLHGFGPRLLTQLATALKARSASERRHLQPDARAQAE
PLLRFVRGLEGVTDAQVAGSLRRRRDTIGDLDIVLCAEDASRVMATVLDYPPISEVMASG
ETRSSVRLDSGLQVDFRIVGRQSFGAALQYFTGSKAHGIALRRRARERGCKLNEYGLFRG
DERLAGETEEGVYRALGLPWIVPELREDSGEIDAAERGALPHLVELRDLRGDLHCHTRDS
DGSNSLRDMALAAQRLGWEYLAITDHSQHLNIAHGMDAERLARQLDEIDRVNEELDGLTL
LKGCEVDILADGSLDLPDSLLERLDIVVGAVHGYFRLSAAQHTRRILRAMDSPWFTVLAH
PTGRLLLERDAFAVDMRAVIRHARQRGCFLELNAQPQRLDLDEHYCRLAKEEGVLVSIAS
DAHRVFDFALLDYGVGQARRGWLERGDVLNTRSLAQLRSLLQRSR
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgcctggctctccgcgcgcaagcgccggcctgccggcggtggataacgagcgcatcgcc
cgagtgttcgaggaaatcgccgacctgctggagctggaggtggccaacccgttccgcatt
cgcgcctatcgaaatgcggcgcgcagcgtgcgcggcgcggagtcgtcgctcgccgcactc
gtactcgccggcgagcccttgccgaagctgcccggcatcggcgaagacctggccgagaag
atccaggtcatcagccgcaccggcacctgcccgctgctcgagcgcctgcatggcgaggtg
ccggccgggcagaccgagctgctgcacctgccgtccatcgggccgaagcgggtgcgcctg
ctgcatcaggagctgggcatcgattcgttgcaggacctccaggctgccctgggcaatggc
cgcctggcgcgcctgcacggtttcgggccgcgcctgctgacgcagctcgccacggccctg
aaggccaggagcgccagcgagcgccggcacctgcaaccggacgctcgcgcccaggccgag
cccttgctgcggttcgtccgcgggctcgagggcgtgacggatgcccaggtcgccggcagc
ctgcgccgacggcgggataccatcggcgacctggatatcgtcctgtgtgccgaagatgcc
tcgcgtgtcatggcgacggtgctggactacccgccgatcagcgaagtcatggcatccggg
gaaacacgcagcagcgtgcgcctggacagcggcctgcaggtggattttcgcatcgtcggg
cggcaaagcttcggcgcggcgctgcagtacttcaccggcagcaaggcccacggcatagcc
ctgcgccgacgtgcccgcgagcgcggctgcaagctcaacgagtacggcctgtttcgcggc
gacgagcggctcgccggggaaaccgaggagggcgtctaccgtgcgctcggcctgccctgg
atcgtccccgagctgcgggaggacagcggcgagatcgacgccgccgaacgcggtgcgctg
ccgcatctggtggaactgcgcgacctgcgcggcgacctgcattgccacacacgcgacagc
gacggcagcaacagcctccgtgacatggcgctggcggcgcagcgcctgggctgggagtac
ctggccatcaccgatcactcgcagcatctgaatatcgcccacggtatggatgcggagcgg
ctggcgcggcagctggacgagatcgaccgggtcaacgaggaactggacggcctgaccctg
ctcaaggggtgcgaggtggacatcctcgccgacggcagcctggacctccccgacagcctg
ctggagcgcctcgatatcgtggtgggcgccgtgcatggctatttccggctgtccgctgcg
cagcatacccgacgcatcctgcgggcgatggactcgccctggttcaccgtgctggcgcac
ccgaccggacgcctgctgttggagcgcgacgcctttgccgtggacatgcgcgcggtgatc
cgccatgcgcggcagcgcggctgcttcctggagctgaacgcgcaaccccagcgcctggac
ctggatgagcactactgccggctcgccaaggaggagggcgtgctggtcagcatcgcctcg
gacgcgcatcgggtgttcgacttcgccctgctcgactatggcgtcggccaggcccggcgc
ggctggctcgagcgtggcgacgtcctcaacacgcgcagcctggcgcagttgcggtcattg
ctgcaaaggagtcgatga

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