Pseudomonas knackmussii: PKB_3987
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Entry
PKB_3987 CDS
T03081
Name
(GenBank) hypothetical protein
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PKB_3987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5801
VWA_2
VWA
HemolysinCabind
VWA_3
DUF2201
Motif
Other DBs
NCBI-ProteinID:
CDF85316
UniProt:
A0A024HKB6
LinkDB
All DBs
Position
complement(4186278..4191800)
Genome browser
AA seq
1840 aa
AA seq
DB search
MATITDKDGDHASTSLDLGGKLTFLDDGPSISLSGGSLAGLVVDETHLNVDASSANVSSL
FSGNYGADGAGTTAYSVTTTDNTDSGLKDTATGQEIFLFNTANGVEGRVGGSGGAVAFAV
TVSNGVVTLDQQRALVHPNGNDSNDPLSIGSGKVSLVATITDKDGDHASTSLDLGGKLTF
LDDGPSISLSGGSFAGLTVDETNLTIDANSTNVSSLFSGNYGADGAGTTTYSVSTTDNTD
SGLKDTATGQEIFLFNTANGVEGRVGGSGGAVAFAVTVSNGVVTLDQQRALVHSNANDPN
DPLSIGTGKIGLVATITDKDGDHASTSLDLGGKLTFLDDGPSISLSGGSFAGLTVDETNL
TIDANSTNVSSLFSGNYGADGAGTTAYSVTTTDNTDSGLKDTATGQEVFLFNTANGVEGR
VGGSNGAVAFAVTVSNGVVTLDQQRALVHPNGNDSNDPLSIGSGKVSLVATITDKDGDHA
STSLDLGGKLTFLDDGPSISLSGGSFAGLTVDETNLTIDANSTNVSSLFSGNYGADGAGT
TTYSVSTTDNTDSGLKDTATGQEVFLFNTANGVEGRVGGSNGAVAFAVTVSNGVVTLDQQ
RALVHPNGNDSNDPLSIGSGKVSLVATITDKDGDHASTSLDLGGKLTFLDDGPSISLSGG
SFGALTVDETNLSINASSTNVSSLFSSSYGADGAGGVSYQVSTTNNTDSGLKDTATGQEI
FLFNTANGVEGRVGGVNGAVAFAVTISNGVVTLDQQRALYHSDPNDANDSLSIGSGKISL
VGTVTDGDGDKASVGIDLGGKLSFLDDAPTIGQGSGNVQLTVDETHLGTDASANVTSLFS
VNFGADGAASSNSLTYQLTTTNNTDSGLKDTATGQSIFLFKEGSNVVGRVGGSGGAVAFT
VSLDGSGNVTLDQQRALVHSNASDPNDPLSLASGKIGLTLTATDGDGDKTTASVDLGSKL
TFLDDGPTAVDDNPGCLLVQAPPAVNLTLVLDTSGSMEGNKLTQAKAALINMLHEYAAMG
LLIQVSLINFASAASGITHYSFDSASDSGYTSLVNAINGLQADGGTNYQAALTQAQNAVN
SVINAPGADPSAINRVYFISDGEPNEGNTNTALTNWQSFLAAHNGTTNNVEAFAVGVGTS
ITDADLVGIDSHGTPIIVSNPNDLSATLGNLVALDSVSGNVLANDLPVSADGTVRITQVQ
IGGETFSVDSTGHLTDTNPNASTATATYDSTTGLLTVQTDNGTLTLYMKDSGTHHMGDYT
YAVKAGAAFPESGQISETFRYTIVDGDGDTASANLNLCLKYGQPILVLGSNAGDTEGSTP
LHTVPSPLGPDHGAISGSFGSDVLVGDAGGVTTTAVPGKNYNIALIVDTSGSMDSASGTT
GLTRMDLAKNALINLLNQIKTHDGTINLALVSFSDGSTLTQVNGLNSSNVQTLINVISHL
SASGATNYDAALQAASNWFNTEVSGGANAAHNYINLAFFLTDGNPTTYVGDNGNSGSTTN
YNDVQHALASASSMLDGTGTFSGADHVAVNAIGIGTGINSTVLQFFDNTSVTGSSSLQLG
GQTITDNVGQPQIINTADQLQAALQEGFQQSAPQGVGNDHLIGGDGNDILFGDVINTDAL
SWTGHAAGTHNGAGYQGLVDYLTAGNGGTAPSQGQLVNYIVAHAQDLNVAGDTRGGNDIL
EGGKGDDLLFGQGGNDTLLGGDGNDILFGGMGDDTLTGGAGADQFVWQKGETGHDVVKDF
NIGEGDSLNLADLLQGETSTAASLSHYLTFSVNAATTTTSISVNPTGASGGATTQTIDLA
NVDLAAKYAGHAGNGILSAGDTQTVLNGLLHDHAVKVDTV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccatcaccgacaaggatggcgaccatgcatcgaccagtctggacttgggcggc
aagctgaccttcctcgacgacggcccgagcatcagcctcagtggcggcagcctcgctggc
ctggtggtcgatgaaacccacctcaacgtcgacgccagcagcgccaacgtctccagcctg
ttcagcggcaactacggcgccgatggtgcaggcactacggcttacagcgtcacgaccacc
gacaacaccgacagcggcctgaaggacaccgcgaccggccaggaaatcttcctgttcaac
actgccaatggcgtggaagggcgggtaggcggaagcggtggggctgtggcctttgccgtc
accgtgagcaacggcgtggtcaccctcgaccagcagcgcgccttggtgcatccgaatggc
aatgactcgaacgacccgctgagcatcggcagcggcaaggtcagcctggtggcgaccatc
accgacaaggacggcgaccacgcctcgaccagcctcgacctgggcggtaagttgaccttc
cttgacgacggcccgagcatcagcctcagcggtggcagcttcgccgggctgacagtggac
gaaaccaatctgacgatcgacgcgaacagcaccaacgtctccagcctgttcagcggcaac
tatggtgccgacggcgcggggaccacgacctacagcgtcagcaccaccgacaacactgac
agcggcctgaaggacaccgcgaccggccaggaaatcttcctgttcaacactgccaatggc
gtggaagggcgggtaggcggaagcggtggggctgtggcctttgccgtcaccgtgagcaac
ggcgtggtgaccctcgaccagcaacgtgcgctggtgcacagcaatgccaatgacccgaat
gacccgctgagcatcggcactggcaagatcggcctggtggcgaccatcaccgacaaggat
ggcgaccatgcatcgaccagtctggacttgggcggcaagctgaccttcctcgacgacggc
ccgagcatcagcctcagcggtggcagcttcgccgggctgacagtggacgaaaccaatctg
acgatcgacgcgaacagcaccaacgtctccagcctgttcagcggcaactacggcgccgat
ggtgcaggcactacggcttacagcgtcacgaccaccgacaacaccgacagcggcctgaag
gacaccgcgaccggccaggaagtcttcctgttcaacaccgccaatggcgtggagggccgc
gtaggcggcagcaatggtgccgtggcctttgccgtcaccgtgagcaacggcgtggtcacc
ctcgaccagcagcgcgccttggtgcatccgaatggcaatgactcgaacgacccgctgagc
atcggcagcggcaaggtcagcctggtggcgaccatcaccgacaaggacggcgaccacgcc
tcgaccagcctcgacctgggcggtaagttgaccttcctcgacgacggcccgagcatcagc
ctcagcggtggcagcttcgccgggctgacagtggacgaaaccaatctgacgatcgacgcg
aacagcaccaacgtctccagcctgttcagcggcaactatggtgccgacggcgcggggacc
acgacctacagcgtcagcaccaccgacaacactgacagcggcctgaaggacaccgcgacc
ggccaggaagtcttcctgttcaacaccgccaatggcgtggagggccgcgtaggcggcagc
aatggtgccgtggcctttgccgtcaccgtgagcaacggcgtggtcaccctcgaccagcag
cgcgccttggtgcatccgaatggcaatgactcgaacgacccgctgagcatcggcagcggc
aaggtcagcctggtggcgaccatcaccgacaaggacggcgaccacgcctcgaccagcctc
gacctgggcggtaagttgaccttccttgacgacggcccgagcatcagcctcagcggtggc
agcttcggcgcactgaccgtcgacgaaaccaacctgagcatcaatgccagcagcaccaac
gtctccagcctgttcagcagcagctacggggccgatggcgccggcggcgtcagctatcag
gtgagcaccaccaacaacaccgacagcggcctgaaggacaccgccacgggccaggaaatc
ttcctgttcaataccgccaatggcgtggaagggcgggtaggcggcgtcaatggcgccgtg
gccttcgccgtgaccatcagcaatggcgtcgtgaccctcgaccagcagcgcgcgctgtac
cactccgatccgaacgacgcaaacgactcgctgagcatcggtagcggcaagatcagcctg
gtcggcaccgtgaccgatggcgacggcgacaaggccagcgtcggcatcgacctgggcggc
aagctgagcttcctcgacgacgccccgaccatcggccagggcagcggcaacgtgcagctg
accgtggacgagacgcacctgggcaccgacgccagcgccaatgtcaccagcctgttcagc
gtcaacttcggcgccgacggcgcggccagcagcaactcgctgacctaccagctgaccacc
accaacaacaccgacagcggcctgaaggacaccgccaccgggcagagcatcttcctcttc
aaggaaggcagcaatgtggtcggccgggtgggcggcagcggcggggcggtggccttcacc
gtgtccctcgacggcagtggcaacgtcaccctcgaccagcaacgcgccctggtgcattcc
aatgccagcgacccgaacgatccgctgagcctggccagcggcaagatcggcctgaccctg
acggcgaccgacggcgacggcgacaagaccacggccagcgtcgacctgggcagcaagctg
accttcctcgacgacggcccgaccgcggtggacgacaaccccggttgcctgctggtgcaa
gcgccgccggcggtgaacctgaccttggtgctggacacctccggcagcatggaaggcaac
aagctgacccaggccaaggccgcgctgatcaacatgctccacgagtacgcggccatgggg
ctgttgatccaggtctcgctgatcaacttcgcctccgcggccagcggcatcacccactac
agcttcgatagcgccagcgacagcggctacaccagcctggtcaacgccatcaacggcctg
caggccgacggcgggaccaactaccaggcggcgctgacccaggcgcagaacgccgtcaac
tcggtgatcaacgcgccgggcgccgatccctcggccatcaaccgggtgtacttcatctcc
gatggcgagccgaacgagggcaacaccaacaccgccctgaccaactggcaaagcttcctc
gccgcgcacaatggcaccaccaataacgtcgaagccttcgcggtcggggtcggcacctcg
atcaccgacgccgacctggtgggtatcgacagccacggcacgccgatcatcgtcagcaac
ccgaacgacctctcggccaccctcggcaacctggtagcgctggactcggtgagcggcaac
gtgctggccaacgacctgccggtgagtgccgacggtaccgtgcgcatcacccaggtgcag
atcggtggcgagaccttctcggtggactccaccgggcacctcaccgacaccaacccgaac
gcctcgacggccaccgccacctacgactcgaccaccggcctgctgaccgtgcagaccgac
aacggcaccctgacgctgtacatgaaggacagcggcacgcaccacatgggcgactacacc
tatgcggtcaaggccggcgccgccttcccggaaagcgggcagatcagcgagaccttccgc
tacaccatcgtcgatggcgacggcgacaccgcctcggccaacctcaacctgtgcctgaag
tacggccagccgatcctggtgctgggcagcaatgccggcgataccgagggctcgactccc
ctgcacaccgtgcccagcccgctcggcccggaccacggcgccatcagcggcagcttcggc
agcgacgtgctggtcggcgatgccggaggcgtcaccaccaccgcggttcccggcaagaac
tacaacatcgccctgatagtcgacacctcaggcagcatggacagcgcttcgggcaccacc
gggctgacccgcatggacctggccaagaatgcgttgatcaacctgctcaaccagatcaag
acccacgacggcaccatcaacctggcactggtgtccttcagcgacggctcgaccctgact
caggtgaacggcctgaacagcagcaacgtgcagaccctgatcaacgtcatcagccacctc
agcgccagtggcgccaccaactacgacgctgcgctgcaggcggccagcaactggttcaac
accgaagtgagcggtggcgccaatgccgcgcacaactacatcaacctggcgttcttcctc
accgacggcaacccgaccacctatgtcggcgacaacggcaacagcggctcgaccaccaac
tacaacgatgtgcaacacgccctggcgtctgcgtcctcgatgctcgacggcaccggaacc
ttcagcggcgccgaccatgtcgcggtgaacgccatcggcatcggaaccggcatcaacagc
accgtcctgcagttcttcgacaacaccagcgtgaccggctccagcagcctgcagctgggt
ggccagacgatcaccgacaacgtcggccagccgcagatcatcaacaccgccgaccagctg
caagctgccctgcaggaaggcttccagcagagcgcgccgcagggggtaggcaacgaccac
ctgatcggtggcgacggcaacgacatcctcttcggcgacgtgatcaacaccgacgcgctg
agctggaccggtcatgccgccggcacccacaacggcgccggctaccagggcctggtggat
tacctgacggcgggcaacggcggcaccgcgccgagccagggccaactggtcaactacata
gtcgcgcacgcccaggacctgaacgtcgccggcgatacccgtggtggcaacgacatcctc
gaaggcggcaagggcgacgacctgctgttcggccagggcggcaacgacaccctgctgggc
ggcgacggcaacgacatcctcttcggcggcatgggcgacgacaccctcaccggcggcgcg
ggcgccgaccagttcgtctggcagaagggcgagaccgggcacgacgtggtcaaggacttc
aacatcggcgaaggcgattcgctgaacctggccgacctgctgcagggcgagacctccacg
gccgcgtcgctatcgcactacctgaccttctcggtgaacgccgccaccacgaccaccagc
atctcggtgaaccccaccggcgcgtcgggcggcgcgacgacccagaccatcgacctggcc
aacgtcgacctggcggccaagtacgccgggcacgccggcaacggcatcctctccgccggc
gacacccagaccgtgctcaacggcctgctgcacgaccatgcggtcaaggtcgataccgtc
tga
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